RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ATP5G3P48201 142 aa11.85□□□□□ -0.51
UBE3D-208ENST00000626828 DAZ2Q13117 558 aaKnown RBP11.85□□□□□ -0.51
UBE3D-208ENST00000626828 PRR9Q5T870 116 aa11.85□□□□□ -0.51
UBE3D-208ENST00000626828 ZNF471Q9BX82 626 aaPredicted RBP11.85□□□□□ -0.51
UBE3D-208ENST00000626828 EPDR1Q9UM22 224 aa11.85□□□□□ -0.51
UBE3D-208ENST00000626828 BCL2L11O43521 198 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 TCRAP04437 139 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 GNG5P63218 68 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 TMUB2Q71RG4 321 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 NKX6-2Q9C056 277 aaPredicted RBP11.84□□□□□ -0.51
UBE3D-208ENST00000626828 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 DNAH1Q9P2D7 4330 aa11.84□□□□□ -0.51
UBE3D-208ENST00000626828 UMAD1C9J7I0 102 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 PFDN1O60925 122 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 Q6AWC8 147 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 LINC00612Q8N6U2 182 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 TMPRSS5Q9H3S3 457 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
UBE3D-208ENST00000626828 FBLL1A6NHQ2 334 aaKnown RBP11.82□□□□□ -0.52
UBE3D-208ENST00000626828 F5H768 121 aa11.82□□□□□ -0.52
UBE3D-208ENST00000626828 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
UBE3D-208ENST00000626828 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
UBE3D-208ENST00000626828 Q6ZQT7 251 aa11.82□□□□□ -0.52
UBE3D-208ENST00000626828 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
UBE3D-208ENST00000626828 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
UBE3D-208ENST00000626828 TRAV8-1A0A0A6YYK1 113 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 MAP1LC3B2A6NCE7 125 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GAGE7O76087 117 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 IFNA7P01567 189 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 P0DMU3 169 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 FAM231AP0DMU4 169 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 FAM231CP0DMU5 169 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 FAM159AQ6UWV7 190 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 MAP1LC3BQ9GZQ8 125 aa11.81□□□□□ -0.52
UBE3D-208ENST00000626828 TPT1P13693 172 aaKnown RBP11.8□□□□□ -0.52
UBE3D-208ENST00000626828 TCL1AP56279 114 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 TMEM88Q6PEY1 159 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 CYB561D1Q8N8Q1 229 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 MBD3L1Q8WWY6 194 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 TVP23CQ96ET8 276 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 SGK494Q96LW2 274 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 ATG101Q9BSB4 218 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 TP53TG3Q9ULZ0 132 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 PSG8Q9UQ74 426 aa11.8□□□□□ -0.52
UBE3D-208ENST00000626828 HYDINQ4G0P3 5121 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 TRAV21A0A0B4J279 112 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 FAM74A7A6NL05 159 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 FHITP49789 147 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 UBE2G2P60604 165 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 FLI1Q01543 452 aaPredicted RBP11.79□□□□□ -0.52
UBE3D-208ENST00000626828 LGALSLQ3ZCW2 172 aaPredicted RBP11.79□□□□□ -0.52
UBE3D-208ENST00000626828 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 KLF12Q9Y4X4 402 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 MUC4Q99102 2169 aa11.79□□□□□ -0.52
UBE3D-208ENST00000626828 SPINK4O60575 86 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 C1QBP02746 253 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 LGALS9BQ3B8N2 356 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 TDRG1Q3Y452 100 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 EIF5AL1Q6IS14 154 aaKnown RBP11.78□□□□□ -0.52
UBE3D-208ENST00000626828 Q6ZTI0 123 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 POM121L12Q8N7R1 296 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 HIST1H2BAQ96A08 127 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 C18orf15Q96N68 181 aa11.78□□□□□ -0.52
UBE3D-208ENST00000626828 NACAE9PAV3 2078 aa11.77□□□□□ -0.52
UBE3D-208ENST00000626828 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 F6UZH7 168 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 IGLV2-11P01706 119 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 PPT1P50897 306 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 ZNF415Q09FC8 603 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 OR5I1Q13606 314 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 PRNTQ86SH4 94 aa11.77□□□□□ -0.53
UBE3D-208ENST00000626828 H2AFB1P0C5Y9 115 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 TMEM183BQ1AE95 376 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 SMUG1Q53HV7 270 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 TMEM183AQ8IXX5 376 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 KCNS1Q96KK3 526 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 SPXQ9BT56 116 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 MDFICQ9P1T7 246 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 ARL2-SNX15V9GYD0 113 aa11.76□□□□□ -0.53
UBE3D-208ENST00000626828 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
UBE3D-208ENST00000626828 PEX7O00628 323 aa11.75□□□□□ -0.53
UBE3D-208ENST00000626828 RAB5CP51148 216 aa11.75□□□□□ -0.53
UBE3D-208ENST00000626828 RNF212Q495C1 297 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms