RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CXorf1O96002 111 aa8.74□□□□□ -1.01
LINC00963-217ENST00000624009 ARL14EPLP0DKL9 152 aa8.74□□□□□ -1.01
LINC00963-217ENST00000624009 ZNF345Q14585 488 aa8.74□□□□□ -1.01
LINC00963-217ENST00000624009 C5orf17Q8NAS9 161 aa8.74□□□□□ -1.01
LINC00963-217ENST00000624009 ACTR3CQ9C0K3 210 aaPredicted RBP8.74□□□□□ -1.01
LINC00963-217ENST00000624009 DNAH2Q9P225 4427 aa8.73□□□□□ -1.01
LINC00963-217ENST00000624009 GCHFRP30047 84 aa8.73□□□□□ -1.01
LINC00963-217ENST00000624009 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
LINC00963-217ENST00000624009 PRR9Q5T870 116 aa8.73□□□□□ -1.01
LINC00963-217ENST00000624009 RPL7L1Q6DKI1 246 aaKnown RBP8.73□□□□□ -1.01
LINC00963-217ENST00000624009 LINC00336Q6ZUF6 198 aa8.73□□□□□ -1.01
LINC00963-217ENST00000624009 DNAH17Q9UFH2 4485 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 A0A1W2PRE2 83 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 K7EQM0 130 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 SPINK4O60575 86 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 UBE2DNLQ8IWF7 75 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 Q8TAT8 98 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 ARPC5LQ9BPX5 153 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 NKX6-2Q9C056 277 aaPredicted RBP8.72□□□□□ -1.01
LINC00963-217ENST00000624009 SH3BGRL3Q9H299 93 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
LINC00963-217ENST00000624009 CTXND1A0A1B0GTU2 59 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 ARPC5O15511 151 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 Q6ZTI0 123 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 GOLT1AQ6ZVE7 132 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 HYLS1Q96M11 299 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 GSN-AS1Q9NRJ2 163 aa8.71□□□□□ -1.02
LINC00963-217ENST00000624009 FAT2Q9NYQ8 4349 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 TRGV11A0A075B6L2 103 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 GAGE7O76087 117 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 TCRAP04437 139 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 CCL18P55774 89 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 ZNF415Q09FC8 603 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 SLAQ13239 276 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 Q6ZR54 194 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 SPXQ9BT56 116 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
LINC00963-217ENST00000624009 TRGV2A0A075B6R0 118 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 TRAV21A0A0B4J279 112 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
LINC00963-217ENST00000624009 AKR1C8PQ5T2L2 129 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 KCNRGQ8N5I3 272 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 RASL10AQ92737 203 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 KCNS1Q96KK3 526 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 CYTL1Q9NRR1 136 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 ARL2-SNX15V9GYD0 113 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
LINC00963-217ENST00000624009 TRAV26-1A0A087WT03 109 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TRGV1A0A0A0MS02 117 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 A0A0D9SG52 128 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 EIF3GO75821 320 aaKnown RBP eCLIP8.68□□□□□ -1.02
LINC00963-217ENST00000624009 HOXA5P20719 270 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 OR5I1Q13606 314 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 CYB561D1Q8N8Q1 229 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TMEM75Q8N9X5 138 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TCEAL7Q9BRU2 100 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 ATG101Q9BSB4 218 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TMPRSS5Q9H3S3 457 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TREM1Q9NP99 234 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 EPDR1Q9UM22 224 aa8.68□□□□□ -1.02
LINC00963-217ENST00000624009 TRAV8-1A0A0A6YYK1 113 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 GGTLC3B5MD39 225 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 NUDT3O95989 172 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 IGLV2-11P01706 119 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 SEC11BP0C7V7 166 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 SUMO1P63165 101 aaKnown RBP8.67□□□□□ -1.02
LINC00963-217ENST00000624009 ZNF726P1Q15940 193 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 SAPCD1Q5SSQ6 148 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 Q6ZQT7 251 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 SSX7Q7RTT5 188 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 IQCF2Q8IXL9 164 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 HIST1H2BAQ96A08 127 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 TVP23CQ96ET8 276 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 UPK3BQ9BT76 320 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 RPH3ALQ9UNE2 315 aa8.67□□□□□ -1.02
LINC00963-217ENST00000624009 UMAD1C9J7I0 102 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 FHITP49789 147 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 GNG5P63218 68 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
LINC00963-217ENST00000624009 FLI1Q01543 452 aaPredicted RBP8.66□□□□□ -1.02
LINC00963-217ENST00000624009 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 ZNRF2Q8NHG8 242 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 PSG8Q9UQ74 426 aa8.66□□□□□ -1.02
LINC00963-217ENST00000624009 PFN1P07737 140 aaKnown RBP8.65□□□□□ -1.02
LINC00963-217ENST00000624009 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
LINC00963-217ENST00000624009 PPT1P50897 306 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 TMEM183BQ1AE95 376 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 MUC21Q5SSG8 566 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 DPPA3Q6W0C5 159 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 TMEM183AQ8IXX5 376 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 STOML3Q8TAV4 291 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.02
LINC00963-217ENST00000624009 SDF2L1Q9HCN8 221 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms