RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 VSIG2Q96IQ7 327 aa11.91□□□□□ -0.5
HMGN3-203ENST00000620514 DIRC3C9JPN6 131 aa11.9□□□□□ -0.5
HMGN3-203ENST00000620514 ESRGQ1W209 222 aa11.9□□□□□ -0.5
HMGN3-203ENST00000620514 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
HMGN3-203ENST00000620514 HYLS1Q96M11 299 aa11.9□□□□□ -0.5
HMGN3-203ENST00000620514 MRPL16Q9NX20 251 aaKnown RBP11.9□□□□□ -0.5
HMGN3-203ENST00000620514 TRBV7-9A0A0J9YWB2 115 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 H3BNG1 76 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 HMGB3O15347 200 aaKnown RBP11.89□□□□□ -0.51
HMGN3-203ENST00000620514 PTTG1O95997 202 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 ZNF266Q14584 549 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 MUC21Q5SSG8 566 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 IBA57Q5T440 356 aaKnown RBP11.89□□□□□ -0.51
HMGN3-203ENST00000620514 C18orf15Q96N68 181 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 Q9H8V8 135 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 RPH3ALQ9UNE2 315 aa11.89□□□□□ -0.51
HMGN3-203ENST00000620514 PGPA6NDG6 321 aa11.88□□□□□ -0.51
HMGN3-203ENST00000620514 IGHV3-53P01767 116 aa11.88□□□□□ -0.51
HMGN3-203ENST00000620514 TNP2Q05952 138 aa11.88□□□□□ -0.51
HMGN3-203ENST00000620514 MED28Q9H204 178 aa11.88□□□□□ -0.51
HMGN3-203ENST00000620514 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
HMGN3-203ENST00000620514 A0A096LPF7 62 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 Q5BKY6 102 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 C6orf223Q8N319 242 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 HSD17B11Q8NBQ5 300 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 OR10G4Q8NGN3 311 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 OR10G9Q8NGN4 311 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 OR10G7Q8NGN6 311 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 KRTAP17-1Q9BYP8 105 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 KRTAP1-5Q9BYS1 174 aa11.87□□□□□ -0.51
HMGN3-203ENST00000620514 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 Q6AWC8 147 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 ZNF575Q86XF7 245 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 CMTM2Q8TAZ6 248 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 ST6GAL2Q96JF0 529 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 MDFICQ9P1T7 246 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 MUC4Q99102 2169 aa11.86□□□□□ -0.51
HMGN3-203ENST00000620514 GNG5P63218 68 aa11.85□□□□□ -0.51
HMGN3-203ENST00000620514 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
HMGN3-203ENST00000620514 AQP10Q96PS8 301 aa11.85□□□□□ -0.51
HMGN3-203ENST00000620514 UPK3BQ9BT76 320 aa11.85□□□□□ -0.51
HMGN3-203ENST00000620514 MRPS16Q9Y3D3 137 aaKnown RBP11.85□□□□□ -0.51
HMGN3-203ENST00000620514 LENEPQ9Y5L5 61 aa11.85□□□□□ -0.51
HMGN3-203ENST00000620514 ARL14EPLP0DKL9 152 aa11.84□□□□□ -0.51
HMGN3-203ENST00000620514 CDC34P49427 236 aaPredicted RBP11.84□□□□□ -0.51
HMGN3-203ENST00000620514 TMEM183BQ1AE95 376 aa11.84□□□□□ -0.51
HMGN3-203ENST00000620514 TMEM183AQ8IXX5 376 aa11.84□□□□□ -0.51
HMGN3-203ENST00000620514 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
HMGN3-203ENST00000620514 TVP23CQ96ET8 276 aa11.84□□□□□ -0.51
HMGN3-203ENST00000620514 TRAV8-1A0A0A6YYK1 113 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 PAX4O43316 350 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 ATP6V0CP27449 155 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 FAM74A1Q5RGS3 127 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 NAGKQ9UJ70 344 aa11.83□□□□□ -0.52
HMGN3-203ENST00000620514 RYR1P21817 5038 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 F6UZH7 168 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 STAG3L2P0CL84 134 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 STAG3L3P0CL85 134 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 MED14OSP0DP75 135 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 FHL2Q14192 279 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 SGK494Q96LW2 274 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 C8orf49Q96NF6 230 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 PSMG3Q9BT73 122 aaPredicted RBP11.82□□□□□ -0.52
HMGN3-203ENST00000620514 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
HMGN3-203ENST00000620514 GNRH2O43555 120 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 GIPP09681 153 aaPredicted RBP11.81□□□□□ -0.52
HMGN3-203ENST00000620514 SFTA3P0C7M3 94 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 CRYBA4P53673 196 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 RAB24Q969Q5 203 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 PRO0255Q9UI72 69 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 PCLOQ9Y6V0 5065 aa11.81□□□□□ -0.52
HMGN3-203ENST00000620514 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 GCHFRP30047 84 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 ZNF479Q96JC4 524 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 TREM1Q9NP99 234 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 HHLA3Q9XRX5 114 aa11.8□□□□□ -0.52
HMGN3-203ENST00000620514 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
HMGN3-203ENST00000620514 TDRG1Q3Y452 100 aa11.79□□□□□ -0.52
HMGN3-203ENST00000620514 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
HMGN3-203ENST00000620514 SUN5Q8TC36 379 aa11.79□□□□□ -0.52
HMGN3-203ENST00000620514 SPXQ9BT56 116 aa11.79□□□□□ -0.52
HMGN3-203ENST00000620514 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 TRAV21A0A0B4J279 112 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 TRGV4A0A0C4DH28 118 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 IGHV3-16A0A0C4DH30 117 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 SERF2P84101 59 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 RASL10AQ92737 203 aa11.78□□□□□ -0.52
HMGN3-203ENST00000620514 A0A1W2PPQ1 181 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 MBP02144 154 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 TCRAP04437 139 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 TYMSP04818 313 aa11.77□□□□□ -0.53
HMGN3-203ENST00000620514 SLAQ13239 276 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms