RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FAM110AQ9BQ89 295 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 IGLV3-12A0A075B6K2 115 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 C5orf67F2Z3F1 127 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 FOXF2Q12947 444 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.08□□□□□ -1.28
TTC28-208ENST00000612946 DEFB124Q8NES8 71 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 LTBRP36941 435 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 C15orf32Q32M92 178 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 PSG7Q13046 419 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 ZNF726P1Q15940 193 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 PRR30Q53SZ7 412 aaPredicted RBP7.08□□□□□ -1.28
TTC28-208ENST00000612946 CLEC19AQ6UXS0 136 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 SH2D6Q7Z4S9 175 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 CRYGBP07316 175 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 IGKV1-27A0A075B6S5 117 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 TRBV6-1A0A0K0K1D8 114 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 E9PLD3 99 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 ZNF474Q6S9Z5 364 aaPredicted RBP7.08□□□□□ -1.28
TTC28-208ENST00000612946 FOXL2NBQ6ZUU3 175 aa7.08□□□□□ -1.28
TTC28-208ENST00000612946 ZNF71Q9NQZ8 489 aaPredicted RBP7.07□□□□□ -1.28
TTC28-208ENST00000612946 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
TTC28-208ENST00000612946 IGKV1-12A0A0C4DH73 117 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 IGKV1D-12P01611 117 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 UBE2BP63146 152 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 TRIP6Q15654 476 aaKnown RBP7.07□□□□□ -1.28
TTC28-208ENST00000612946 CYYR1Q96J86 154 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 TRGV4A0A0C4DH28 118 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 K7EM74 188 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 Q8NFD4 153 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 IGKV1D-43A0A0B4J1Z2 117 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 WFDC2Q14508 124 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
TTC28-208ENST00000612946 MUSTN1Q8IVN3 82 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 SELENOKQ9Y6D0 94 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 UNQ6494/PRO21346Q6UXR6 183 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 DKK2Q9UBU2 259 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 SDHAF1A6NFY7 115 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 C17orf100A8MU93 164 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 M0R1W7 72 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 NDUFA4L2Q9NRX3 87 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 RNF152Q8N8N0 203 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 U3KQE9 123 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 INS-IGF2F8WCM5 200 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 TMEM92Q6UXU6 159 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 C11orf44Q8N8P7 122 aa7.06□□□□□ -1.28
TTC28-208ENST00000612946 IGHV3OR16-12A0A075B7B8 117 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 SMKR1H3BMG3 65 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 PAX9P55771 341 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 PRR25Q96S07 402 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 COX6B1P14854 86 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 C1orf159Q96HA4 380 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 HIVEP2P31629 2446 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 SLC22A18ASQ8N1D0 253 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 WFDC12Q8WWY7 111 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 P0DMU3 169 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 FAM231CP0DMU5 169 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 FXYD5Q96DB9 178 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 K7EN84 100 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 CENPVL3A0A0U1RRI6 287 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 PPIFP30405 207 aaKnown RBP7.05□□□□□ -1.28
TTC28-208ENST00000612946 ZFP2Q6ZN57 461 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 CFHR4Q92496 578 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 IGKV3D-20A0A0C4DH25 116 aa7.05□□□□□ -1.28
TTC28-208ENST00000612946 NDUFB1O75438 58 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 LMO1P25800 156 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 C8orf31Q8N9H6 132 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 DCTN5Q9BTE1 182 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 C3orf36Q3SXR2 165 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 FAM216BQ8N7L0 139 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 SLC25A29Q8N8R3 303 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 LINC00473A8K010 186 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 CCL3L1P16619 93 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 ZFP36L1Q07352 338 aaKnown RBP7.04□□□□□ -1.28
TTC28-208ENST00000612946 STHQ8IWL8 128 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 SERP2Q8N6R1 65 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 ZNF625Q96I27 306 aaPredicted RBP7.04□□□□□ -1.28
TTC28-208ENST00000612946 NOTCH4Q99466 2003 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 ETV2O00321 342 aaPredicted RBP7.04□□□□□ -1.28
TTC28-208ENST00000612946 TMEM256-PLSCR3K7ERE1 68 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 LGALS9O00182 355 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 FXYD2P54710 66 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 ZNF784Q8NCA9 323 aaPredicted RBP7.04□□□□□ -1.28
TTC28-208ENST00000612946 H3BRN7 92 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 Q6ZRM9 215 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 SIGLEC9Q9Y336 463 aa7.04□□□□□ -1.28
TTC28-208ENST00000612946 LINC01619G3V211 115 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 ITLN2Q8WWU7 325 aaPredicted RBP7.03□□□□□ -1.28
TTC28-208ENST00000612946 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 DAZ1Q9NQZ3 744 aaKnown RBP7.03□□□□□ -1.28
TTC28-208ENST00000612946 SSC4DQ8WTU2 575 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 TMEM213A2RRL7 107 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 RNF138Q8WVD3 245 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 A0A087WV48 116 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 GATA4P43694 442 aa7.03□□□□□ -1.28
TTC28-208ENST00000612946 NDUFA11Q86Y39 141 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms