RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ASCL2Q99929 193 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 AGPAT4-IT1Q9H0P7 198 aa6.71□□□□□ -1.34
CCDC47-207ENST00000612558 SORL1Q92673 2214 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 A0A1B0GUS0 222 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 FAM231BA6NCW3 169 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 IZUMO1RA6ND01 250 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 TRGC2P03986 189 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 SMUG1Q53HV7 270 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 FAM162BQ5T6X4 162 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 ADAMTSL5Q6ZMM2 481 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 OR10J6PQ8NGY7 276 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 GPR61Q9BZJ8 451 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 GFRA4Q9GZZ7 299 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 LENEPQ9Y5L5 61 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 SELENOKQ9Y6D0 94 aa6.7□□□□□ -1.34
CCDC47-207ENST00000612558 K7EQG2 157 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 CSN3P07498 182 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 TCL1AP56279 114 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 SNRPD3P62318 126 aaKnown RBP6.69□□□□□ -1.34
CCDC47-207ENST00000612558 ZFP82Q8N141 532 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 OR2D3Q8NGH3 330 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 NEU1Q99519 415 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 FABP5P3A8MUU1 101 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 HIGD1CA8MV81 97 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 SH2D1AO60880 128 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 ZNF705DP0CH99 300 aaPredicted RBP6.69□□□□□ -1.34
CCDC47-207ENST00000612558 ZNF705BP0CI00 300 aaPredicted RBP6.69□□□□□ -1.34
CCDC47-207ENST00000612558 TFPI2P48307 235 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 COX19Q49B96 90 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
CCDC47-207ENST00000612558 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 OR8A1Q8NGG7 326 aa6.69□□□□□ -1.34
CCDC47-207ENST00000612558 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 TRBV7-9A0A0J9YWB2 115 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 XKRY2A2RUG3 117 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 PHOX2AO14813 284 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 ZNF80P51504 273 aaPredicted RBP6.68□□□□□ -1.34
CCDC47-207ENST00000612558 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
CCDC47-207ENST00000612558 SRSF2Q01130 221 aaKnown RBP6.68□□□□□ -1.34
CCDC47-207ENST00000612558 RASL11AQ6T310 242 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 DYNLRB2Q8TF09 96 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 SIGLEC8Q9NYZ4 499 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 TRAPPC1Q9Y5R8 145 aa6.68□□□□□ -1.34
CCDC47-207ENST00000612558 JMJD1CQ15652 2540 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 LOC105371267A0A1B0GV96 52 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 TMEM189A5PLL7 270 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 SPINK4O60575 86 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 S100A6P06703 90 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H1AQ02539 215 aaPredicted RBP6.67□□□□□ -1.34
CCDC47-207ENST00000612558 DEFB114Q30KQ6 69 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 PSMG4Q5JS54 123 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 MRPL54Q6P161 138 aaKnown RBP6.67□□□□□ -1.34
CCDC47-207ENST00000612558 WDR73Q6P4I2 378 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 ATP5L2Q7Z4Y8 100 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 NDUFA11Q86Y39 141 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 GTSF1Q8WW33 167 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 FRZBQ92765 325 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
CCDC47-207ENST00000612558 SAV1Q9H4B6 383 aaPredicted RBP6.67□□□□□ -1.34
CCDC47-207ENST00000612558 TRAV25A0A0B4J276 109 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 F6UB75 175 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 GZMBP10144 247 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 DEFB1P60022 68 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 FABP9Q0Z7S8 132 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 NSUN5P1Q3KNT7 163 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
CCDC47-207ENST00000612558 Q6AWC8 147 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 TMEM61Q8N0U2 210 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 PGLYRP4Q96LB8 373 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 FAM19A4Q96LR4 140 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
CCDC47-207ENST00000612558 SNURFLB1AK76 121 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 ORM1P02763 201 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 MT-ND6P03923 174 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 FRMD6-AS1P0C7T7 363 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 CRISP2P16562 243 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 CD300EQ496F6 205 aaPredicted RBP6.65□□□□□ -1.34
CCDC47-207ENST00000612558 EBLN2Q6P2I7 272 aa6.65□□□□□ -1.34
CCDC47-207ENST00000612558 A0A0J9YX75 114 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 A0A1B0GXF2 115 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 GPX1P07203 203 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 RAB4BP61018 213 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 FOXI2Q6ZQN5 318 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 TMEM136Q6ZRR5 245 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms