RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 C20orf78Q9BR46 151 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 LGALS9BQ3B8N2 356 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 LGALS9CQ6DKI2 356 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 CTSZQ9UBR2 303 aa12.4□□□□□ -0.42
TNXB-208ENST00000611016 SOCS3O14543 225 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
TNXB-208ENST00000611016 ARFGEF3Q5TH69 2177 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 TRAV8-3A0A0A6YYJ7 113 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 IGHV3-38A0A0C4DH36 116 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 IGHV4-61A0A0C4DH41 118 aa12.39□□□□□ -0.43
TNXB-208ENST00000611016 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 PLXND1Q9Y4D7 1925 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 DOCK9Q9BZ29 2069 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 IGHV4-30-2A0A087WSY4 118 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 UTF1Q5T230 341 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 IGF2-ASQ6U949 168 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 LENEPQ9Y5L5 61 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 ABCA1O95477 2261 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 ZNF625Q96I27 306 aaPredicted RBP12.38□□□□□ -0.43
TNXB-208ENST00000611016 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 RBAKDNA6NC62 111 aa12.38□□□□□ -0.43
TNXB-208ENST00000611016 A0A096LPF7 62 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 EREGO14944 169 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 IGFBPL1Q8WX77 278 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 GAGE6Q13070 117 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 NAA38Q9BRA0 125 aaKnown RBP12.37□□□□□ -0.43
TNXB-208ENST00000611016 SPRNQ5BIV9 151 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 V9GYV3 84 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 HERVK_113P63121 156 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 COX11Q9Y6N1 276 aa12.37□□□□□ -0.43
TNXB-208ENST00000611016 SNHG12Q9BXW3 62 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 C9JQL5 133 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 RBMY1FQ15415 496 aaKnown RBP12.36□□□□□ -0.43
TNXB-208ENST00000611016 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
TNXB-208ENST00000611016 OCIAD2Q56VL3 154 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 NKAPP1Q8N9T2 125 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 NRGNQ92686 78 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 CCL24O00175 119 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 CGB3P0DN86 165 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 DEFB136Q30KP8 78 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 UBE2WQ96B02 151 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 TRAV26-2A0A0B4J265 109 aa12.36□□□□□ -0.43
TNXB-208ENST00000611016 IGLC1P0CG04 106 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 GAGE2AQ6NT46 116 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 FOXI2Q6ZQN5 318 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 IGHV4-38-2P0DP08 117 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 C9JAW5 83 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 C11orf53Q8IXP5 236 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 Q8NFD4 153 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
TNXB-208ENST00000611016 TRAV13-2A0A0B4J235 113 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 SIVA1O15304 175 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 HOXD3P31249 432 aaPredicted RBP12.34□□□□□ -0.43
TNXB-208ENST00000611016 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 POLR3KQ9Y2Y1 108 aaPredicted RBP12.34□□□□□ -0.43
TNXB-208ENST00000611016 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
TNXB-208ENST00000611016 RNF152Q8N8N0 203 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 PCNX1Q96RV3 2341 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 ADORA2A-AS1P86434 159 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 VWC2Q2TAL6 325 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 ZNF114Q8NC26 417 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 KLF2Q9Y5W3 355 aaPredicted RBP12.34□□□□□ -0.43
TNXB-208ENST00000611016 DOCK10Q96BY6 2186 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 RHOHQ15669 191 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 ADAMTSL5Q6ZMM2 481 aa12.34□□□□□ -0.43
TNXB-208ENST00000611016 DKK4Q9UBT3 224 aa12.33□□□□□ -0.43
TNXB-208ENST00000611016 VOPP1Q96AW1 172 aa12.33□□□□□ -0.44
TNXB-208ENST00000611016 TEX48A0A1B0GUV7 120 aa12.33□□□□□ -0.44
TNXB-208ENST00000611016 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
TNXB-208ENST00000611016 PFN2P35080 140 aa12.33□□□□□ -0.44
TNXB-208ENST00000611016 FXYD5Q96DB9 178 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 C9orf118A6NHY6 69 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 LTAP01374 205 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 COX8AP10176 69 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 ZNF726P1Q15940 193 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 CENPVL3A0A0U1RRI6 287 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 ZNF493Q6ZR52 646 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 WIPF2Q8TF74 440 aaPredicted RBP12.32□□□□□ -0.44
TNXB-208ENST00000611016 PPDPFLQ8WWR9 84 aa12.32□□□□□ -0.44
TNXB-208ENST00000611016 ZNF48Q96MX3 618 aaPredicted RBP12.32□□□□□ -0.44
TNXB-208ENST00000611016 F8W1H4 67 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 F8VRH5 84 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 F6UB75 175 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 PRR20EP86478 221 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 PRR20CP86479 221 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 PRR20DP86480 221 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 PRR20BP86481 221 aa12.31□□□□□ -0.44
TNXB-208ENST00000611016 PRR20AP86496 221 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms