RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
MUC1-222ENST00000610468 SUN5Q8TC36 379 aa9.59□□□□□ -0.87
MUC1-222ENST00000610468 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
MUC1-222ENST00000610468 TMPRSS5Q9H3S3 457 aa9.59□□□□□ -0.87
MUC1-222ENST00000610468 KCNIP2Q9NS61 270 aa9.59□□□□□ -0.87
MUC1-222ENST00000610468 TRAV12-3A0A0B4J271 114 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 HIST1H1EP10412 219 aaKnown RBP9.58□□□□□ -0.88
MUC1-222ENST00000610468 SERF2P84101 59 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 Q6ZTI0 123 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 C11orf72Q8NBR9 251 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 LINC00467Q9BRT7 94 aa9.58□□□□□ -0.88
MUC1-222ENST00000610468 A0A096LPF7 62 aa9.57□□□□□ -0.88
MUC1-222ENST00000610468 A0A0D9SG52 128 aa9.57□□□□□ -0.88
MUC1-222ENST00000610468 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
MUC1-222ENST00000610468 TMUB2Q71RG4 321 aa9.57□□□□□ -0.88
MUC1-222ENST00000610468 ZNF680Q8NEM1 530 aa9.57□□□□□ -0.88
MUC1-222ENST00000610468 FAM19A4Q96LR4 140 aa9.57□□□□□ -0.88
MUC1-222ENST00000610468 KLLNB2CW77 178 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 J3KRW8 73 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 BCL2L11O43521 198 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
MUC1-222ENST00000610468 STAG3L2P0CL84 134 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 STAG3L3P0CL85 134 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 NDUFA5Q16718 116 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 ACOT6Q3I5F7 207 aaPredicted RBP9.56□□□□□ -0.88
MUC1-222ENST00000610468 C9orf62Q8N4C0 152 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 OR10G4Q8NGN3 311 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 OR10G9Q8NGN4 311 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 OR10G7Q8NGN6 311 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 ARPC5LQ9BPX5 153 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 OR51M1Q9H341 326 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
MUC1-222ENST00000610468 BORCS7-ASMTA0A0B4J1R7 106 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 C7orf71A4D174 169 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 M0R3E3 92 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 ZNF324O75467 553 aaPredicted RBP9.55□□□□□ -0.88
MUC1-222ENST00000610468 NBEAP1P0C6P0 100 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 PDE6HQ13956 83 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 ANXA2RQ3ZCQ2 193 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 STOML3Q8TAV4 291 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 PHYHIPLQ96FC7 376 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 GSN-AS1Q9NRJ2 163 aa9.55□□□□□ -0.88
MUC1-222ENST00000610468 TRGV2A0A075B6R0 118 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 OR10J4P0C629 311 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 LINC00315P59091 139 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 EXOC3-AS1Q8N2X6 119 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 RAB24Q969Q5 203 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 PAXXQ9BUH6 204 aa9.54□□□□□ -0.88
MUC1-222ENST00000610468 SPINK4O60575 86 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 NMBP08949 121 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 CRISP2P16562 243 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 FHITP49789 147 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 NKX2-5P52952 324 aaPredicted RBP9.53□□□□□ -0.88
MUC1-222ENST00000610468 TCL1AP56279 114 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 LINC00477Q96M19 166 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 AGPAT4-IT1Q9H0P7 198 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
MUC1-222ENST00000610468 TRGV1A0A0A0MS02 117 aa9.52□□□□□ -0.89
MUC1-222ENST00000610468 HMGB3O15347 200 aaKnown RBP9.52□□□□□ -0.89
MUC1-222ENST00000610468 SEC11BP0C7V7 166 aa9.52□□□□□ -0.89
MUC1-222ENST00000610468 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
MUC1-222ENST00000610468 ERCC8Q13216 396 aa9.52□□□□□ -0.89
MUC1-222ENST00000610468 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
MUC1-222ENST00000610468 IBA57Q5T440 356 aaKnown RBP9.52□□□□□ -0.89
MUC1-222ENST00000610468 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
MUC1-222ENST00000610468 EIF4E3Q8N5X7 224 aaKnown RBP9.52□□□□□ -0.89
MUC1-222ENST00000610468 SIVA1O15304 175 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 MBP02144 154 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 ARL14EPLP0DKL9 152 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 KHDC3LQ587J8 217 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 ZFAND2AQ8N6M9 145 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 BLNKQ8WV28 456 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 KLF12Q9Y4X4 402 aa9.51□□□□□ -0.89
MUC1-222ENST00000610468 OR7C2O60412 319 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 IFNA7P01567 189 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 GCHFRP30047 84 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 TAS2R45P59539 299 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 ICAM4Q14773 271 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 LYPD1Q8N2G4 141 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 MBD3L1Q8WWY6 194 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 VGLL1Q99990 258 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 ZNF471Q9BX82 626 aaPredicted RBP9.5□□□□□ -0.89
MUC1-222ENST00000610468 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
MUC1-222ENST00000610468 CTXND1A0A1B0GTU2 59 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 KANTRA0A1W2PQU2 76 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 PAX4O43316 350 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 NXPH4O95158 308 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 RNASE4P34096 147 aaKnown RBP9.49□□□□□ -0.89
MUC1-222ENST00000610468 UBE2L3P68036 154 aaKnown RBP9.49□□□□□ -0.89
MUC1-222ENST00000610468 PRR9Q5T870 116 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 ACTR3CQ9C0K3 210 aaPredicted RBP9.49□□□□□ -0.89
MUC1-222ENST00000610468 PRO0255Q9UI72 69 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 BOLA1Q9Y3E2 137 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 HERC1Q15751 4861 aa9.49□□□□□ -0.89
MUC1-222ENST00000610468 IGKV2-40A0A087WW87 121 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms