RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 LYPD1Q8N2G4 141 aa8.59□□□□□ -1.03
CTSA-210ENST00000606000 EIF4E3Q8N5X7 224 aaKnown RBP8.59□□□□□ -1.03
CTSA-210ENST00000606000 TRAV26-1A0A087WT03 109 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 TRAV8-1A0A0A6YYK1 113 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 RGS13O14921 159 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 RTL8CO15255 209 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
CTSA-210ENST00000606000 ANXA2RQ3ZCQ2 193 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 PQLC2Q6ZP29 291 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 ZNF680Q8NEM1 530 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 OR2G3Q8NGZ4 309 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 LINC00467Q9BRT7 94 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
CTSA-210ENST00000606000 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
CTSA-210ENST00000606000 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 F6UZH7 168 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 NMBP08949 121 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 STAG3L2P0CL84 134 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 STAG3L3P0CL85 134 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 TCL1AP56279 114 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 RNF212Q495C1 297 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 Q6ZR54 194 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 RAB24Q969Q5 203 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 SGK494Q96LW2 274 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 ATG101Q9BSB4 218 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 PSMG3Q9BT73 122 aaPredicted RBP8.57□□□□□ -1.04
CTSA-210ENST00000606000 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 DNAH2Q9P225 4427 aa8.57□□□□□ -1.04
CTSA-210ENST00000606000 SPINK4O60575 86 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 IGHV3-53P01767 116 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 LGALS9BQ3B8N2 356 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 KCNRGQ8N5I3 272 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 CMTM2Q8TAZ6 248 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 RXFP4Q8TDU9 374 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 GNPNAT1Q96EK6 184 aaPredicted RBP8.56□□□□□ -1.04
CTSA-210ENST00000606000 TVP23CQ96ET8 276 aa8.56□□□□□ -1.04
CTSA-210ENST00000606000 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 BORCS7-ASMTA0A0B4J1R7 106 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 TRBV7-9A0A0J9YWB2 115 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 HMSDA8MTL9 139 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 GCHFRP30047 84 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 IBA57Q5T440 356 aaKnown RBP8.55□□□□□ -1.04
CTSA-210ENST00000606000 ZNRF2Q8NHG8 242 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 ARPC5LQ9BPX5 153 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 CYTL1Q9NRR1 136 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 MDFICQ9P1T7 246 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 NAGKQ9UJ70 344 aa8.55□□□□□ -1.04
CTSA-210ENST00000606000 A0A1B0GVY2 172 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 GGTLC3B5MD39 225 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 C1QBP02746 253 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 ZNF345Q14585 488 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 FAM74A1Q5RGS3 127 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 Q6AWC8 147 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 TMUB2Q71RG4 321 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
CTSA-210ENST00000606000 KANTRA0A1W2PQU2 76 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 BCL2L11O43521 198 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 PFDN1O60925 122 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 NKX2-5P52952 324 aaPredicted RBP8.53□□□□□ -1.04
CTSA-210ENST00000606000 SERF2P84101 59 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 TMEM183BQ1AE95 376 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 ZFP69Q49AA0 526 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 IQCF2Q8IXL9 164 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 TMEM183AQ8IXX5 376 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 SUN5Q8TC36 379 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 TMED6Q8WW62 240 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 C8orf49Q96NF6 230 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 ZNF471Q9BX82 626 aaPredicted RBP8.53□□□□□ -1.04
CTSA-210ENST00000606000 LENEPQ9Y5L5 61 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
CTSA-210ENST00000606000 A0A0D9SG52 128 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 TAAR5O14804 337 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 MBP02144 154 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 TCRAP04437 139 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 CCL18P55774 89 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.05
CTSA-210ENST00000606000 LINC00336Q6ZUF6 198 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 ACTR3CQ9C0K3 210 aaPredicted RBP8.52□□□□□ -1.05
CTSA-210ENST00000606000 TREM1Q9NP99 234 aa8.52□□□□□ -1.05
CTSA-210ENST00000606000 A0A096LPF7 62 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 GNRH2O43555 120 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 CXorf1O96002 111 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 IGLV2-11P01706 119 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 ZNF80P51504 273 aaPredicted RBP8.51□□□□□ -1.05
CTSA-210ENST00000606000 FGF8P55075 233 aaPredicted RBP8.51□□□□□ -1.05
CTSA-210ENST00000606000 FAM3BP58499 235 aaPredicted RBP8.51□□□□□ -1.05
CTSA-210ENST00000606000 SUMO1P63165 101 aaKnown RBP8.51□□□□□ -1.05
CTSA-210ENST00000606000 ESRGQ1W209 222 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 FAM159AQ6UWV7 190 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 C5orf17Q8NAS9 161 aa8.51□□□□□ -1.05
CTSA-210ENST00000606000 DNAH17Q9UFH2 4485 aa8.5□□□□□ -1.05
CTSA-210ENST00000606000 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 215.3 ms