RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 OTORQ9NRC9 128 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 TP53TG3Q9ULZ0 132 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 KLF12Q9Y4X4 402 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 PKD1P98161 4303 aa12.61□□□□□ -0.39
CCDC12-208ENST00000603885 HERC2O95714 4834 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 SPINK4O60575 86 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 Q6ZQT7 251 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 OR10G4Q8NGN3 311 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 OR10G9Q8NGN4 311 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 OR10G7Q8NGN6 311 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
CCDC12-208ENST00000603885 PGPA6NDG6 321 aa12.59□□□□□ -0.39
CCDC12-208ENST00000603885 AQP10Q96PS8 301 aa12.59□□□□□ -0.39
CCDC12-208ENST00000603885 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
CCDC12-208ENST00000603885 HSD17B11Q8NBQ5 300 aa12.58□□□□□ -0.4
CCDC12-208ENST00000603885 TMED6Q8WW62 240 aa12.58□□□□□ -0.4
CCDC12-208ENST00000603885 RPH3ALQ9UNE2 315 aa12.58□□□□□ -0.4
CCDC12-208ENST00000603885 HMGB3O15347 200 aaKnown RBP12.57□□□□□ -0.4
CCDC12-208ENST00000603885 CDC34P49427 236 aaPredicted RBP12.57□□□□□ -0.4
CCDC12-208ENST00000603885 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 Q6AWC8 147 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 OR2G3Q8NGZ4 309 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 ASB13Q8WXK3 278 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 ST6GAL2Q96JF0 529 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
CCDC12-208ENST00000603885 MUC4Q99102 2169 aa12.57□□□□□ -0.4
CCDC12-208ENST00000603885 GIPP09681 153 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-208ENST00000603885 C6orf223Q8N319 242 aa12.56□□□□□ -0.4
CCDC12-208ENST00000603885 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
CCDC12-208ENST00000603885 VSIG2Q96IQ7 327 aa12.56□□□□□ -0.4
CCDC12-208ENST00000603885 PSMG3Q9BT73 122 aaPredicted RBP12.56□□□□□ -0.4
CCDC12-208ENST00000603885 Q9H8V8 135 aa12.56□□□□□ -0.4
CCDC12-208ENST00000603885 DNAH11Q96DT5 4516 aa12.56□□□□□ -0.4
CCDC12-208ENST00000603885 DYNC1H1Q14204 4646 aaKnown RBP12.55□□□□□ -0.4
CCDC12-208ENST00000603885 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 ATP6V0CP27449 155 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 ESRGQ1W209 222 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 FAM159AQ6UWV7 190 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 GOLT1AQ6ZVE7 132 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
CCDC12-208ENST00000603885 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 MBP02144 154 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 STAG3L2P0CL84 134 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 STAG3L3P0CL85 134 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 Q5BKY6 102 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 TTC32Q5I0X7 151 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 INO80EQ8NBZ0 244 aaPredicted RBP12.54□□□□□ -0.4
CCDC12-208ENST00000603885 MRPS16Q9Y3D3 137 aaKnown RBP12.54□□□□□ -0.4
CCDC12-208ENST00000603885 KIAA1109Q2LD37 5005 aa12.54□□□□□ -0.4
CCDC12-208ENST00000603885 A0A096LPF7 62 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 SERF2P84101 59 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 TMEM183BQ1AE95 376 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 RAB24Q969Q5 203 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 MDFICQ9P1T7 246 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 NAGKQ9UJ70 344 aa12.53□□□□□ -0.4
CCDC12-208ENST00000603885 PAX4O43316 350 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 GNG5P63218 68 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 SLAQ13239 276 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 SPXQ9BT56 116 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 TREM1Q9NP99 234 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 PRO0255Q9UI72 69 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
CCDC12-208ENST00000603885 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 SERTM2A0A1B0GWG4 89 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 GCHFRP30047 84 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 SH3BGRL3Q9H299 93 aa12.51□□□□□ -0.41
CCDC12-208ENST00000603885 F6UZH7 168 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 MED14OSP0DP75 135 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 TNP2Q05952 138 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
CCDC12-208ENST00000603885 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 TNFSF18Q9UNG2 199 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
CCDC12-208ENST00000603885 BORCS7-ASMTA0A0B4J1R7 106 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 A0A1W2PPQ1 181 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 RNF222A6NCQ9 220 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 K7EQM0 130 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 CXorf1O96002 111 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 CRYBA4P53673 196 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 FHL2Q14192 279 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 RGS21Q2M5E4 152 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 RASL10AQ92737 203 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 TVP23CQ96ET8 276 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 KRTAP1-5Q9BYS1 174 aa12.49□□□□□ -0.41
CCDC12-208ENST00000603885 TRGV4A0A0C4DH28 118 aa12.48□□□□□ -0.41
CCDC12-208ENST00000603885 TCRAP04437 139 aa12.48□□□□□ -0.41
CCDC12-208ENST00000603885 RPL7L1Q6DKI1 246 aaKnown RBP12.48□□□□□ -0.41
CCDC12-208ENST00000603885 SFTA3P0C7M3 94 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms