RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SLC25A31Q9H0C2 315 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
SHKBP1-227ENST00000602011 IGSF23A1L1A6 192 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 RBAKDNA6NC62 111 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 INMT-MINDY4F8WBC2 141 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 PRAF2O60831 178 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 IFNA5P01569 189 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 PYYP10082 97 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 RAB32Q13637 225 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 SPXQ9BT56 116 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 LENEPQ9Y5L5 61 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 FAT1Q14517 4588 aa12.18□□□□□ -0.46
SHKBP1-227ENST00000602011 ORM1P02763 201 aa12.17□□□□□ -0.46
SHKBP1-227ENST00000602011 FHL2Q14192 279 aa12.17□□□□□ -0.46
SHKBP1-227ENST00000602011 SEC22CQ9BRL7 303 aa12.17□□□□□ -0.46
SHKBP1-227ENST00000602011 TP53TG3Q9ULZ0 132 aa12.17□□□□□ -0.46
SHKBP1-227ENST00000602011 LY96Q9Y6Y9 160 aa12.17□□□□□ -0.46
SHKBP1-227ENST00000602011 EVI2AP22794 236 aa12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 RASL10AQ92737 203 aa12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 FAM167A-AS1Q96KT0 104 aa12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 SLC25A2Q9BXI2 301 aa12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 DMBT1Q9UGM3 2413 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-227ENST00000602011 TRGV4A0A0C4DH28 118 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 E5RGE8 158 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 ZNF266Q14584 549 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 RGS21Q2M5E4 152 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 PCNPQ8WW12 178 aaKnown RBP12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 PAXXQ9BUH6 204 aa12.15□□□□□ -0.46
SHKBP1-227ENST00000602011 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 SRIP30626 198 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 CYCSP99999 105 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 OR10G4Q8NGN3 311 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 C8orf49Q96NF6 230 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 TXNDC17Q9BRA2 123 aa12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
SHKBP1-227ENST00000602011 TRGV11A0A075B6L2 103 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 IGHV3-53P01767 116 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 FAM159AQ6UWV7 190 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 MIR17HGQ75NE6 70 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 TMED6Q8WW62 240 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 FXYD5Q96DB9 178 aa12.13□□□□□ -0.47
SHKBP1-227ENST00000602011 A0A087WTM6 91 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 NHLH2Q02577 135 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 Q6AWC8 147 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 ARL6IP6Q8N6S5 226 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 NMES1Q9C002 83 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
SHKBP1-227ENST00000602011 C9JCJ5 164 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 K7EQD1 137 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 DNAH10OSP0CZ25 163 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 PRR9Q5T870 116 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 THAP6Q8TBB0 222 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 FRZBQ92765 325 aa12.11□□□□□ -0.47
SHKBP1-227ENST00000602011 VPS13BQ7Z7G8 4022 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 INAFM2P0DMQ5 153 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 XGP55808 180 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 TIRAPP58753 221 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 TAS2R45P59539 299 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 RANP62826 216 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 TDRG1Q3Y452 100 aa12.1□□□□□ -0.47
SHKBP1-227ENST00000602011 OR7C2O60412 319 aa12.09□□□□□ -0.47
SHKBP1-227ENST00000602011 CIDEAO60543 219 aa12.09□□□□□ -0.47
SHKBP1-227ENST00000602011 OR10J4P0C629 311 aa12.09□□□□□ -0.47
SHKBP1-227ENST00000602011 FAM74A1Q5RGS3 127 aa12.09□□□□□ -0.47
SHKBP1-227ENST00000602011 MDFICQ9P1T7 246 aa12.09□□□□□ -0.47
SHKBP1-227ENST00000602011 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
SHKBP1-227ENST00000602011 GYPEP15421 78 aa12.08□□□□□ -0.48
SHKBP1-227ENST00000602011 PHYHIPLQ96FC7 376 aa12.08□□□□□ -0.48
SHKBP1-227ENST00000602011 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 M0R2P5 195 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 GCSHP23434 173 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 TMEM183BQ1AE95 376 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 KHDC3LQ587J8 217 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 MUC21Q5SSG8 566 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 Q8TAT8 98 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 TNFRSF18Q9Y5U5 241 aa12.07□□□□□ -0.48
SHKBP1-227ENST00000602011 FLG2Q5D862 2391 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 SSNA1O43805 119 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 CRYGDP07320 174 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 UBE2L3P68036 154 aaKnown RBP12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 Q6ZQT7 251 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 CMTM2Q8TAZ6 248 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 ATP5SQ99766 215 aa12.06□□□□□ -0.48
SHKBP1-227ENST00000602011 TRAV21A0A0B4J279 112 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms