RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 CXorf1O96002 111 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 GCHFRP30047 84 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 TCL1AP56279 114 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 Q6AWC8 147 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 HYLS1Q96M11 299 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
HERC3-214ENST00000601319 TMEM167BQ9NRX6 74 aa12.07□□□□□ -0.48
HERC3-214ENST00000601319 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 IGHV1OR15-1A0A075B7D0 117 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 SERTM2A0A1B0GWG4 89 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 ZNF345Q14585 488 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 GOLT1AQ6ZVE7 132 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 GSN-AS1Q9NRJ2 163 aa12.06□□□□□ -0.48
HERC3-214ENST00000601319 GAGE12BA1L429 117 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 GAGE7O76087 117 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 GAGE12FP0CL80 117 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 GAGE12GP0CL81 117 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 GAGE12IP0CL82 117 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 FAM3BP58499 235 aaPredicted RBP12.05□□□□□ -0.48
HERC3-214ENST00000601319 Q6ZTI0 123 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 UBE2DNLQ8IWF7 75 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 C5orf17Q8NAS9 161 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 MUC4Q99102 2169 aa12.05□□□□□ -0.48
HERC3-214ENST00000601319 SPINK4O60575 86 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 Q6ZQT7 251 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 ARPC5LQ9BPX5 153 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 CYTL1Q9NRR1 136 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 RPH3ALQ9UNE2 315 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 BIRC6Q9NR09 4857 aa12.04□□□□□ -0.48
HERC3-214ENST00000601319 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 GGTLC3B5MD39 225 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 H3BNG1 76 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 GNG5P63218 68 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 ZNF415Q09FC8 603 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 ZNF726P1Q15940 193 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 LGALS9BQ3B8N2 356 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 TDRG1Q3Y452 100 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 TP53TG3Q9ULZ0 132 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 KLF12Q9Y4X4 402 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 HECTD4Q9Y4D8 3996 aa12.03□□□□□ -0.48
HERC3-214ENST00000601319 TRAV8-1A0A0A6YYK1 113 aa12.02□□□□□ -0.49
HERC3-214ENST00000601319 TCRAP04437 139 aa12.02□□□□□ -0.49
HERC3-214ENST00000601319 HOXA5P20719 270 aa12.02□□□□□ -0.49
HERC3-214ENST00000601319 KCNRGQ8N5I3 272 aa12.02□□□□□ -0.49
HERC3-214ENST00000601319 TRGV2A0A075B6R0 118 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 TRGV1A0A0A0MS02 117 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 A0A1W2PRE2 83 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 SMLR1H3BR10 107 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 K7EQM0 130 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 AKR1C8PQ5T2L2 129 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 TVP23CQ96ET8 276 aa12.01□□□□□ -0.49
HERC3-214ENST00000601319 TRGV11A0A075B6L2 103 aa12□□□□□ -0.49
HERC3-214ENST00000601319 TRAV26-1A0A087WT03 109 aa12□□□□□ -0.49
HERC3-214ENST00000601319 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
HERC3-214ENST00000601319 MUC21Q5SSG8 566 aa12□□□□□ -0.49
HERC3-214ENST00000601319 FAM159AQ6UWV7 190 aa12□□□□□ -0.49
HERC3-214ENST00000601319 NDFIP1Q9BT67 221 aa12□□□□□ -0.49
HERC3-214ENST00000601319 TREM1Q9NP99 234 aa12□□□□□ -0.49
HERC3-214ENST00000601319 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 NUDT3O95989 172 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 OR5I1Q13606 314 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 Q6ZR54 194 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 TMEM75Q8N9X5 138 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 ATG101Q9BSB4 218 aa11.99□□□□□ -0.49
HERC3-214ENST00000601319 IGLV2-11P01706 119 aa11.98□□□□□ -0.49
HERC3-214ENST00000601319 SUMO1P63165 101 aaKnown RBP11.98□□□□□ -0.49
HERC3-214ENST00000601319 IQCF2Q8IXL9 164 aa11.98□□□□□ -0.49
HERC3-214ENST00000601319 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
HERC3-214ENST00000601319 SPXQ9BT56 116 aa11.98□□□□□ -0.49
HERC3-214ENST00000601319 MRPL16Q9NX20 251 aaKnown RBP11.98□□□□□ -0.49
HERC3-214ENST00000601319 EPDR1Q9UM22 224 aa11.98□□□□□ -0.49
HERC3-214ENST00000601319 A0A0D9SG52 128 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 F6UZH7 168 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 CCL18P55774 89 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
HERC3-214ENST00000601319 TMEM183BQ1AE95 376 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 LINC00336Q6ZUF6 198 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 NKX6-2Q9C056 277 aaPredicted RBP11.97□□□□□ -0.49
HERC3-214ENST00000601319 MDFICQ9P1T7 246 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 PSG8Q9UQ74 426 aa11.97□□□□□ -0.49
HERC3-214ENST00000601319 DNAH2Q9P225 4427 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 MAP1LC3B2A6NCE7 125 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 BCL2L11O43521 198 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 KCNS1Q96KK3 526 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 MAP1LC3BQ9GZQ8 125 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
HERC3-214ENST00000601319 A0A0J9YY99 117 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 SEC11BP0C7V7 166 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 RASL10AQ92737 203 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 VSIG2Q96IQ7 327 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 SGK494Q96LW2 274 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 LINC00588Q9Y4M8 146 aa11.95□□□□□ -0.5
HERC3-214ENST00000601319 IGLV2-18A0A075B6J9 118 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms