RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 ZNF726P1Q15940 193 aa9.47□□□□□ -0.89
ARHGEF1-222ENST00000600517 IBA57Q5T440 356 aaKnown RBP9.47□□□□□ -0.89
ARHGEF1-222ENST00000600517 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
ARHGEF1-222ENST00000600517 RPH3ALQ9UNE2 315 aa9.47□□□□□ -0.89
ARHGEF1-222ENST00000600517 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 SERTM2A0A1B0GWG4 89 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GAGE12BA1L429 117 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GAGE7O76087 117 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GAGE12FP0CL80 117 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GAGE12GP0CL81 117 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GAGE12IP0CL82 117 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 GNG5P63218 68 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 RNF212Q495C1 297 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 AKR1C8PQ5T2L2 129 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 Q6AWC8 147 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 Q6ZNX1 250 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 Q6ZTI0 123 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 C15orf53Q8NAA6 179 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 TVP23CQ96ET8 276 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 C18orf15Q96N68 181 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 TP53TG3Q9ULZ0 132 aa9.46□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 A0A0D9SG52 128 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 A0A1W2PRE2 83 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 SPINK4O60575 86 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 TCRAP04437 139 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 TCL1AP56279 114 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 EPDR1Q9UM22 224 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 KLF12Q9Y4X4 402 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 VPS13DQ5THJ4 4388 aa9.45□□□□□ -0.9
ARHGEF1-222ENST00000600517 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
ARHGEF1-222ENST00000600517 TMPRSS5Q9H3S3 457 aa9.44□□□□□ -0.9
ARHGEF1-222ENST00000600517 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
ARHGEF1-222ENST00000600517 K7EQM0 130 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 IGLV2-11P01706 119 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 SEC11BP0C7V7 166 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 HOXA5P20719 270 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 OR5I1Q13606 314 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 LGALS9BQ3B8N2 356 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 TDRG1Q3Y452 100 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 MUC21Q5SSG8 566 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 FAM159AQ6UWV7 190 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 IQCF2Q8IXL9 164 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 SGK494Q96LW2 274 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRGV2A0A075B6R0 118 aa9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRGV1A0A0A0MS02 117 aa9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 FBLL1A6NHQ2 334 aaKnown RBP9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 NKX6-2Q9C056 277 aaPredicted RBP9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 PSG8Q9UQ74 426 aa9.42□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 A0A1B0GVG6 124 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 MAP1LC3B2A6NCE7 125 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 H3BNG1 76 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 BCL2L11O43521 198 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 NUDT3O95989 172 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 FGF8P55075 233 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 FLI1Q01543 452 aaPredicted RBP9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 CYB561D1Q8N8Q1 229 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 TMEM75Q8N9X5 138 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 ATG101Q9BSB4 218 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 MAP1LC3BQ9GZQ8 125 aa9.41□□□□□ -0.9
ARHGEF1-222ENST00000600517 TRGV11A0A075B6L2 103 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 FAM74A7A6NL05 159 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 UMAD1C9J7I0 102 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 F6UZH7 168 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 FHITP49789 147 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 SAPCD1Q5SSQ6 148 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 TMUB2Q71RG4 321 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 TMEM183AQ8IXX5 376 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 STOML3Q8TAV4 291 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 SPXQ9BT56 116 aa9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
ARHGEF1-222ENST00000600517 GNRH2O43555 120 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 IFNA7P01567 189 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 ZNF80P51504 273 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 UBE2G2P60604 165 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 PRNTQ86SH4 94 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 LINC00479Q96M42 142 aa9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 MRPL16Q9NX20 251 aaKnown RBP9.39□□□□□ -0.91
ARHGEF1-222ENST00000600517 EPPK1P58107 5090 aaKnown RBP9.38□□□□□ -0.91
ARHGEF1-222ENST00000600517 IGHV3-16A0A0C4DH30 117 aa9.38□□□□□ -0.91
ARHGEF1-222ENST00000600517 A0A0J9YY99 117 aa9.38□□□□□ -0.91
ARHGEF1-222ENST00000600517 PFDN1O60925 122 aa9.38□□□□□ -0.91
ARHGEF1-222ENST00000600517 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms