RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 CRIP1P50238 77 aa12.21□□□□□ -0.46
TRPM4-209ENST00000598502 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.46
TRPM4-209ENST00000598502 ZNF502Q8TBZ5 544 aa12.21□□□□□ -0.46
TRPM4-209ENST00000598502 Q6AWC8 147 aa12.2□□□□□ -0.46
TRPM4-209ENST00000598502 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
TRPM4-209ENST00000598502 OR11H1Q8NG94 326 aa12.2□□□□□ -0.46
TRPM4-209ENST00000598502 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
TRPM4-209ENST00000598502 RNF183Q96D59 192 aa12.2□□□□□ -0.46
TRPM4-209ENST00000598502 K7ENP7 123 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 HOXA3O43365 443 aaPredicted RBP12.19□□□□□ -0.46
TRPM4-209ENST00000598502 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 RAXQ9Y2V3 346 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 B5MCH6 92 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 IGLV2-23P01705 113 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 C8orf86Q6ZUL3 223 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 VKORC1Q9BQB6 163 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 SVEP1Q4LDE5 3571 aa12.19□□□□□ -0.46
TRPM4-209ENST00000598502 FSTL3O95633 263 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 IGLV2-11P01706 119 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 GATA3P23771 443 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 EFNA4P52798 201 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 ODF1Q14990 250 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 ZNF562Q6V9R5 426 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 B9A039 149 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 E9PLD3 99 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 HES1Q14469 280 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 TNFRSF6BO95407 300 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 CDSNQ15517 529 aa12.18□□□□□ -0.46
TRPM4-209ENST00000598502 IGHV3OR16-13A0A075B7E8 117 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 IGHV3-74A0A0B4J1X5 117 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 TRAV26-2A0A0B4J265 109 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 LINC01549A6NIU2 74 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 RRN3P1Q2M238 152 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
TRPM4-209ENST00000598502 PRTN3P24158 256 aa12.16□□□□□ -0.46
TRPM4-209ENST00000598502 EGR2P11161 476 aaPredicted RBP12.16□□□□□ -0.46
TRPM4-209ENST00000598502 DLX6P56179 175 aa12.16□□□□□ -0.46
TRPM4-209ENST00000598502 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
TRPM4-209ENST00000598502 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
TRPM4-209ENST00000598502 KLRD1Q13241 179 aa12.16□□□□□ -0.46
TRPM4-209ENST00000598502 SPATA25Q9BR10 227 aa12.16□□□□□ -0.46
TRPM4-209ENST00000598502 PRSS29PA6NIE9 313 aa12.15□□□□□ -0.46
TRPM4-209ENST00000598502 RNF125Q96EQ8 232 aa12.15□□□□□ -0.46
TRPM4-209ENST00000598502 FOXI1Q12951 378 aa12.15□□□□□ -0.46
TRPM4-209ENST00000598502 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.47
TRPM4-209ENST00000598502 CREBBPQ92793 2442 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 TNFRSF13BO14836 293 aaPredicted RBP12.14□□□□□ -0.47
TRPM4-209ENST00000598502 HLA-DMBP28068 263 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 PPP1R27Q86WC6 154 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 SCGB2A1O75556 95 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 ATP5LO75964 103 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 TRBV20-1A0A075B6N2 111 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 TMEM238LA0A1B0GVL6 79 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 WI2-2373I1.2A0A1W2PRP0 233 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 BUB1B-PAK6H3BSN5 160 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 LINC00311Q8N616 119 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 TEX29Q8N6K0 151 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 NXT2Q9NPJ8 142 aaKnown RBP12.14□□□□□ -0.47
TRPM4-209ENST00000598502 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
TRPM4-209ENST00000598502 IGHV3-66A0A0C4DH42 116 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 TIMM23O14925 209 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 EMP1P54849 157 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 DLX4Q92988 240 aaPredicted RBP12.13□□□□□ -0.47
TRPM4-209ENST00000598502 KAAG1Q9UBP8 84 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 HHLA3Q9XRX5 114 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 RPL7P18124 248 aaKnown RBP12.13□□□□□ -0.47
TRPM4-209ENST00000598502 SIGLEC15Q6ZMC9 328 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 TCTEX1D4Q5JR98 221 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
TRPM4-209ENST00000598502 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRPM4-209ENST00000598502 SPANXN1Q5VSR9 72 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 SPRY2O43597 315 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 ERCC8Q13216 396 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 ZFP2Q6ZN57 461 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 C1orf122Q6ZSJ8 110 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 XGP55808 180 aa12.12□□□□□ -0.47
TRPM4-209ENST00000598502 IGHV3-49A0A0A0MS15 119 aa12.11□□□□□ -0.47
TRPM4-209ENST00000598502 ZFAND6Q6FIF0 208 aa12.11□□□□□ -0.47
TRPM4-209ENST00000598502 SHANK2-AS3Q9BTD1 123 aa12.11□□□□□ -0.47
TRPM4-209ENST00000598502 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
TRPM4-209ENST00000598502 IGKV1-17P01599 117 aa12.11□□□□□ -0.47
TRPM4-209ENST00000598502 PHLDA1Q8WV24 401 aaPredicted RBP12.11□□□□□ -0.47
TRPM4-209ENST00000598502 HRNRQ86YZ3 2850 aaPredicted RBP12.11□□□□□ -0.47
TRPM4-209ENST00000598502 TRAV8-2A0A0B4J237 113 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 MRGPRG-AS1Q2M3A8 158 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 C1QTNF4Q9BXJ3 329 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 IGLV1-47P01700 117 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 Q1RN00 199 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 Q6ZUT4 128 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 SCGB3A1Q96QR1 104 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 ZNF80P51504 273 aaPredicted RBP12.1□□□□□ -0.47
TRPM4-209ENST00000598502 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
TRPM4-209ENST00000598502 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
TRPM4-209ENST00000598502 KIR2DL4Q99706 377 aa12.09□□□□□ -0.47
TRPM4-209ENST00000598502 TTC32Q5I0X7 151 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms