RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TMEM37Q8WXS4 190 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 YPEL4Q96NS1 127 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 PFDN5Q99471 154 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 TMEM208Q9BTX3 173 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 DNAH6Q9C0G6 4158 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 MUC4Q99102 2169 aa9.81□□□□□ -0.84
SCAF1-203ENST00000598359 TRAV5A0A0B4J249 113 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 TMEM189A5PLL7 270 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 HTN3P15516 51 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 PSG3Q16557 428 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 RRN3P1Q2M238 152 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 MIR17HGQ75NE6 70 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 OR8A1Q8NGG7 326 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 PARLQ9H300 379 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 TMEM242Q9NWH2 141 aa9.8□□□□□ -0.84
SCAF1-203ENST00000598359 YTHDF2Q9Y5A9 579 aaKnown RBP9.8□□□□□ -0.84
SCAF1-203ENST00000598359 ZNF727A8MUV8 499 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 SLC17A3O00476 420 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 INSP01308 110 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 AMBPP02760 352 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 CEBPGP53567 150 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 C10orf113Q5VZT2 155 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 IQCF2Q8IXL9 164 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 RPUSD4Q96CM3 377 aaKnown RBP9.79□□□□□ -0.84
SCAF1-203ENST00000598359 ZNF503Q96F45 646 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 SMIM7Q9BQ49 75 aa9.79□□□□□ -0.84
SCAF1-203ENST00000598359 LOC105371267A0A1B0GV96 52 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 PRAC2D3DTV9 90 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 AZU1P20160 251 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 ATP5G3P48201 142 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 RNF212Q495C1 297 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 FAM167A-AS1Q96KT0 104 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 NDUFAF3Q9BU61 184 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 DNAJC4Q9NNZ3 241 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 ZNF331Q9NQX6 463 aaPredicted RBP9.78□□□□□ -0.84
SCAF1-203ENST00000598359 PRELID1Q9Y255 219 aa9.78□□□□□ -0.84
SCAF1-203ENST00000598359 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 AKR1C3P42330 323 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 TMEM241Q24JQ0 296 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 BPIFA4PQ86YQ2 179 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 SLC25A2Q9BXI2 301 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 CTDSP1Q9GZU7 261 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 PPP1R14DQ9NXH3 145 aa9.77□□□□□ -0.85
SCAF1-203ENST00000598359 A0A1W2PRE2 83 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 IGLC2P0DOY2 106 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 HTN1P15515 57 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 UBE2G2P60604 165 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 DAD1P61803 113 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 RPL23P62829 140 aaKnown RBP9.76□□□□□ -0.85
SCAF1-203ENST00000598359 KIR3DS1Q14943 382 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 DNAH2Q9P225 4427 aa9.76□□□□□ -0.85
SCAF1-203ENST00000598359 CST9LP1Q5W188 147 aa9.75□□□□□ -0.85
SCAF1-203ENST00000598359 LINC01587Q99440 93 aa9.75□□□□□ -0.85
SCAF1-203ENST00000598359 SLC50A1Q9BRV3 221 aa9.75□□□□□ -0.85
SCAF1-203ENST00000598359 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 PLAC8L1A1L4L8 177 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 C9JCJ5 164 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 OR7C2O60412 319 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 DEFB130BP0DP73 79 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 DEFB130AP0DP74 79 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 FLI1Q01543 452 aaPredicted RBP9.74□□□□□ -0.85
SCAF1-203ENST00000598359 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 TCEAL7Q9BRU2 100 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 ZNF586Q9NXT0 402 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 RNF24Q9Y225 148 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
SCAF1-203ENST00000598359 SCO2A0A1W2PP80 73 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 J3KRW8 73 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 M0R2N4 97 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 P0DMU3 169 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 FAM231AP0DMU4 169 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 FAM231CP0DMU5 169 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 ZNF674Q2M3X9 581 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 POM121L12Q8N7R1 296 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
SCAF1-203ENST00000598359 ABCA13Q86UQ4 5058 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 NDUFB4O95168 129 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 PYYP10082 97 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 RAB5AP20339 215 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 CDKN1BP46527 198 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
SCAF1-203ENST00000598359 ELOBQ15370 118 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 ADIRFQ15847 76 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 LINC01551Q86U37 167 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 OR10J6PQ8NGY7 276 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 FXYD5Q96DB9 178 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
SCAF1-203ENST00000598359 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 M0R3E3 92 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 CT45A10P0DMU9 189 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 TSPOP30536 169 aa9.71□□□□□ -0.86
SCAF1-203ENST00000598359 TAS2R60P59551 318 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms