RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 OTORQ9NRC9 128 aa10.48□□□□□ -0.73
LIG1-215ENST00000597901 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
LIG1-215ENST00000597901 ESRGQ1W209 222 aa10.47□□□□□ -0.73
LIG1-215ENST00000597901 Q5BKY6 102 aa10.47□□□□□ -0.73
LIG1-215ENST00000597901 IBA57Q5T440 356 aaKnown RBP10.47□□□□□ -0.73
LIG1-215ENST00000597901 PQLC2Q6ZP29 291 aa10.47□□□□□ -0.73
LIG1-215ENST00000597901 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.73
LIG1-215ENST00000597901 CMTM2Q8TAZ6 248 aa10.46□□□□□ -0.73
LIG1-215ENST00000597901 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
LIG1-215ENST00000597901 AQP10Q96PS8 301 aa10.46□□□□□ -0.73
LIG1-215ENST00000597901 Q9H8V8 135 aa10.46□□□□□ -0.73
LIG1-215ENST00000597901 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
LIG1-215ENST00000597901 HECTD4Q9Y4D8 3996 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 FAM74A1Q5RGS3 127 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 MUC21Q5SSG8 566 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 ARL6IP6Q8N6S5 226 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 TMED6Q8WW62 240 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 ARPC5LQ9BPX5 153 aa10.45□□□□□ -0.74
LIG1-215ENST00000597901 Q6AWC8 147 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 HSD17B11Q8NBQ5 300 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 OR2G3Q8NGZ4 309 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 KRTAP17-1Q9BYP8 105 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
LIG1-215ENST00000597901 MDFICQ9P1T7 246 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 RPH3ALQ9UNE2 315 aa10.44□□□□□ -0.74
LIG1-215ENST00000597901 GIPP09681 153 aaPredicted RBP10.43□□□□□ -0.74
LIG1-215ENST00000597901 STAG3L2P0CL84 134 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 STAG3L3P0CL85 134 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 ATP6V0CP27449 155 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 GOLT1AQ6ZVE7 132 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 RAB24Q969Q5 203 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 ST6GAL2Q96JF0 529 aa10.43□□□□□ -0.74
LIG1-215ENST00000597901 PSMG3Q9BT73 122 aaPredicted RBP10.43□□□□□ -0.74
LIG1-215ENST00000597901 HERC2O95714 4834 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 A0A096LPF7 62 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 CDC34P49427 236 aaPredicted RBP10.42□□□□□ -0.74
LIG1-215ENST00000597901 SERF2P84101 59 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 C6orf223Q8N319 242 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 ASB13Q8WXK3 278 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 TVP23CQ96ET8 276 aa10.42□□□□□ -0.74
LIG1-215ENST00000597901 PAX4O43316 350 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 MBP02144 154 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 SLAQ13239 276 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 FHL2Q14192 279 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 TMEM183BQ1AE95 376 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 TMEM183AQ8IXX5 376 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 INO80EQ8NBZ0 244 aaPredicted RBP10.41□□□□□ -0.74
LIG1-215ENST00000597901 SUN5Q8TC36 379 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 UPK3BQ9BT76 320 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 TNFSF18Q9UNG2 199 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 HHLA3Q9XRX5 114 aa10.41□□□□□ -0.74
LIG1-215ENST00000597901 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
LIG1-215ENST00000597901 TRAV8-1A0A0A6YYK1 113 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 GNRH2O43555 120 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 GCHFRP30047 84 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 GNG5P63218 68 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 TNP2Q05952 138 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 TDRG1Q3Y452 100 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 SPXQ9BT56 116 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 TREM1Q9NP99 234 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 PRO0255Q9UI72 69 aa10.4□□□□□ -0.74
LIG1-215ENST00000597901 TRGV11A0A075B6L2 103 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 TRAV21A0A0B4J279 112 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 CRYBA4P53673 196 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 RPL7L1Q6DKI1 246 aaKnown RBP10.39□□□□□ -0.75
LIG1-215ENST00000597901 RASL10AQ92737 203 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 SGK494Q96LW2 274 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 C8orf49Q96NF6 230 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
LIG1-215ENST00000597901 NAGKQ9UJ70 344 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 PKD1P98161 4303 aa10.39□□□□□ -0.75
LIG1-215ENST00000597901 DYNC1H1Q14204 4646 aaKnown RBP10.38□□□□□ -0.75
LIG1-215ENST00000597901 DNAH11Q96DT5 4516 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 RNF222A6NCQ9 220 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 SUMO1P63165 101 aaKnown RBP10.38□□□□□ -0.75
LIG1-215ENST00000597901 IQCF2Q8IXL9 164 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 OR2T35Q8NGX2 323 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 KIAA1109Q2LD37 5005 aa10.38□□□□□ -0.75
LIG1-215ENST00000597901 FXYD6-FXYD2A0A087WZ82 144 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 BORCS7-ASMTA0A0B4J1R7 106 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 SERTM2A0A1B0GWG4 89 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 F6UZH7 168 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 CXorf1O96002 111 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 TCRAP04437 139 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 C5orf17Q8NAS9 161 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 ZNF479Q96JC4 524 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 KRTAP1-5Q9BYS1 174 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 TMEM167BQ9NRX6 74 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 EPDR1Q9UM22 224 aa10.37□□□□□ -0.75
LIG1-215ENST00000597901 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms