RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 A0A0J9YX75 114 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 TEX48A0A1B0GUV7 120 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 LOC102723971A0A1B0GUV8 181 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 M0R3E3 92 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 PRM2P04554 102 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 PPT1P50897 306 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 TEX261Q6UWH6 196 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 Q8N1X5 172 aa11.57□□□□□ -0.56
SHKBP1-215ENST00000597649 TRAV1-1A0A0B4J248 108 aa11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 SLC25A5P05141 298 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 PRB4P10163 310 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 ZNRF2Q8NHG8 242 aa11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
SHKBP1-215ENST00000597649 NBDYA0A0U1RRE5 68 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 CNN1P51911 297 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 FAM3BP58499 235 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 DAD1P61803 113 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 CST9LP1Q5W188 147 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 ZNF680Q8NEM1 530 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 NKX6-2Q9C056 277 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 GOLT1BQ9Y3E0 138 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 VPS13BQ7Z7G8 4022 aa11.55□□□□□ -0.56
SHKBP1-215ENST00000597649 PRAC2D3DTV9 90 aa11.54□□□□□ -0.56
SHKBP1-215ENST00000597649 IFNA1P01562 189 aa11.54□□□□□ -0.56
SHKBP1-215ENST00000597649 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
SHKBP1-215ENST00000597649 SCRT2Q9NQ03 307 aa11.54□□□□□ -0.56
SHKBP1-215ENST00000597649 GNG13Q9P2W3 67 aa11.54□□□□□ -0.56
SHKBP1-215ENST00000597649 FAM74A7A6NL05 159 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 K7EQM0 130 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 PAGE4O60829 102 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 CCL20P78556 96 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 ARL6IP6Q8N6S5 226 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 C5orf17Q8NAS9 161 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 ATG101Q9BSB4 218 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 ARL2-SNX15V9GYD0 113 aa11.53□□□□□ -0.56
SHKBP1-215ENST00000597649 IGKV2-40A0A087WW87 121 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-215ENST00000597649 DIRC3C9JPN6 131 aa11.52□□□□□ -0.57
SHKBP1-215ENST00000597649 IGKV2D-40P01614 121 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-215ENST00000597649 TMEM78Q5T7P6 136 aa11.52□□□□□ -0.57
SHKBP1-215ENST00000597649 A8MTW9 85 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 ZNF705GA8MUZ8 300 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 GGTLC3B5MD39 225 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 NPIPB6E9PJ23 425 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 F6UZH7 168 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 GNG5P63218 68 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 ERCC8Q13216 396 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 AMTNQ6UX39 209 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 LINC00477Q96M19 166 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 EPDR1Q9UM22 224 aa11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 DMBT1Q9UGM3 2413 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-215ENST00000597649 SERTM2A0A1B0GWG4 89 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 TCRAP04437 139 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 RAB14P61106 215 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 SPATA12Q7Z6I5 190 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 LINC00588Q9Y4M8 146 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 MYCBP2O75592 4640 aa11.5□□□□□ -0.57
SHKBP1-215ENST00000597649 NUDT3O95989 172 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 DEFB130BP0DP73 79 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 DEFB130AP0DP74 79 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 TSPOP30536 169 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 LEPP41159 167 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 ATP5G3P48201 142 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 C9orf47Q6ZRZ4 202 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 IGF2BP2-AS1Q96M15 143 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 VGLL1Q99990 258 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 TCEAL7Q9BRU2 100 aa11.49□□□□□ -0.57
SHKBP1-215ENST00000597649 PLAC8L1A1L4L8 177 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 F5H768 121 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 PEX7O00628 323 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 CRXO43186 299 aaPredicted RBP11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 AZU1P20160 251 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 TAGLN2P37802 199 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 ZNF138P52744 262 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 CYB561D1Q8N8Q1 229 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 PCNPQ8WW12 178 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
SHKBP1-215ENST00000597649 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 M0R2Z0 102 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 CT45A10P0DMU9 189 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 BCL2P10415 239 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 CDKN1BP46527 198 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 KRTAP10-2P60368 255 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 ODF3Q96PU9 254 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 TMEM208Q9BTX3 173 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 ZNF492Q9P255 531 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 VAX2Q9UIW0 290 aa11.47□□□□□ -0.57
SHKBP1-215ENST00000597649 J3KRW8 73 aa11.46□□□□□ -0.57
SHKBP1-215ENST00000597649 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms