RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 RNF222A6NCQ9 220 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 ARPC5O15511 151 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 CCL18P55774 89 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 FAM3BP58499 235 aaPredicted RBP12.21□□□□□ -0.45
IRF3-208ENST00000594387 ZNF415Q09FC8 603 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 LINC00612Q8N6U2 182 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 ST6GAL2Q96JF0 529 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 NACAE9PAV3 2078 aa12.21□□□□□ -0.45
IRF3-208ENST00000594387 DNAH1Q9P2D7 4330 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 GCHFRP30047 84 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 TCL1AP56279 114 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 AKR1C8PQ5T2L2 129 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 Q6ZTI0 123 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 SH3BGRL3Q9H299 93 aa12.2□□□□□ -0.46
IRF3-208ENST00000594387 M0R2N4 97 aa12.19□□□□□ -0.46
IRF3-208ENST00000594387 PRR9Q5T870 116 aa12.19□□□□□ -0.46
IRF3-208ENST00000594387 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
IRF3-208ENST00000594387 C11orf72Q8NBR9 251 aa12.19□□□□□ -0.46
IRF3-208ENST00000594387 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 TRAV26-1A0A087WT03 109 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 LGALS9BQ3B8N2 356 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 MUC21Q5SSG8 566 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 Q6AWC8 147 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 TREM1Q9NP99 234 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 TP53TG3Q9ULZ0 132 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 KLF12Q9Y4X4 402 aa12.18□□□□□ -0.46
IRF3-208ENST00000594387 IGLV2-18A0A075B6J9 118 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 A0A0J9YY99 117 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 CTXND1A0A1B0GTU2 59 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 SPINK4O60575 86 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
IRF3-208ENST00000594387 SOHLH1Q5JUK2 328 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 TMPRSS5Q9H3S3 457 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 NAGKQ9UJ70 344 aa12.17□□□□□ -0.46
IRF3-208ENST00000594387 FBLL1A6NHQ2 334 aaKnown RBP12.16□□□□□ -0.46
IRF3-208ENST00000594387 H3BNG1 76 aa12.16□□□□□ -0.46
IRF3-208ENST00000594387 GNG5P63218 68 aa12.16□□□□□ -0.46
IRF3-208ENST00000594387 ZFP69Q49AA0 526 aa12.16□□□□□ -0.46
IRF3-208ENST00000594387 C18orf15Q96N68 181 aa12.16□□□□□ -0.46
IRF3-208ENST00000594387 SPXQ9BT56 116 aa12.16□□□□□ -0.46
IRF3-208ENST00000594387 TCRAP04437 139 aa12.15□□□□□ -0.46
IRF3-208ENST00000594387 TMEM183BQ1AE95 376 aa12.15□□□□□ -0.46
IRF3-208ENST00000594387 TMEM183AQ8IXX5 376 aa12.15□□□□□ -0.46
IRF3-208ENST00000594387 SUN5Q8TC36 379 aa12.15□□□□□ -0.46
IRF3-208ENST00000594387 KCNS1Q96KK3 526 aa12.15□□□□□ -0.46
IRF3-208ENST00000594387 NKX6-2Q9C056 277 aaPredicted RBP12.15□□□□□ -0.46
IRF3-208ENST00000594387 MUC4Q99102 2169 aa12.15□□□□□ -0.47
IRF3-208ENST00000594387 TRAV8-1A0A0A6YYK1 113 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 IFNA7P01567 189 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 HOXA5P20719 270 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 SLAQ13239 276 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 Q6ZQT7 251 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 STOML3Q8TAV4 291 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
IRF3-208ENST00000594387 EPDR1Q9UM22 224 aa12.14□□□□□ -0.47
IRF3-208ENST00000594387 A0A0D9SG52 128 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 PPT1P50897 306 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 ZNF345Q14585 488 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 SAPCD1Q5SSQ6 148 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 SDF2L1Q9HCN8 221 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 PSG8Q9UQ74 426 aa12.13□□□□□ -0.47
IRF3-208ENST00000594387 KANTRA0A1W2PQU2 76 aa12.12□□□□□ -0.47
IRF3-208ENST00000594387 F6UZH7 168 aa12.12□□□□□ -0.47
IRF3-208ENST00000594387 SMLR1H3BR10 107 aa12.12□□□□□ -0.47
IRF3-208ENST00000594387 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
IRF3-208ENST00000594387 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
IRF3-208ENST00000594387 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
IRF3-208ENST00000594387 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 HMSDA8MTL9 139 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 G3V3Q6 166 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 PAX4O43316 350 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 UBE2G2P60604 165 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 SMUG1Q53HV7 270 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 PRNTQ86SH4 94 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 KCNRGQ8N5I3 272 aa12.11□□□□□ -0.47
IRF3-208ENST00000594387 MAP1LC3B2A6NCE7 125 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 FGF8P55075 233 aaPredicted RBP12.1□□□□□ -0.47
IRF3-208ENST00000594387 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 MAP1LC3BQ9GZQ8 125 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 PRO0255Q9UI72 69 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 LINC00588Q9Y4M8 146 aa12.1□□□□□ -0.47
IRF3-208ENST00000594387 PRSS29PA6NIE9 313 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 GGTLC3B5MD39 225 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 GNRH2O43555 120 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 PFDN1O60925 122 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 GCGP01275 180 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms