RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
DNMT1-229ENST00000593049 SSX7Q7RTT5 188 aa11.65□□□□□ -0.54
DNMT1-229ENST00000593049 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
DNMT1-229ENST00000593049 IGHV1OR15-1A0A075B7D0 117 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 ATP5G1P05496 136 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 ATP5G3P48201 142 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
DNMT1-229ENST00000593049 IBA57Q5T440 356 aaKnown RBP11.64□□□□□ -0.55
DNMT1-229ENST00000593049 PRR9Q5T870 116 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 Q6AWC8 147 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 TMUB2Q71RG4 321 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 NDFIP1Q9BT67 221 aa11.64□□□□□ -0.55
DNMT1-229ENST00000593049 MAP1LC3B2A6NCE7 125 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 TCRAP04437 139 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 GNG5P63218 68 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 MAP1LC3BQ9GZQ8 125 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 EPDR1Q9UM22 224 aa11.63□□□□□ -0.55
DNMT1-229ENST00000593049 ALMS1Q8TCU4 4167 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 TPT1P13693 172 aaKnown RBP11.62□□□□□ -0.55
DNMT1-229ENST00000593049 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 CYB561D1Q8N8Q1 229 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 C15orf53Q8NAA6 179 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 ATG101Q9BSB4 218 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 TREM1Q9NP99 234 aa11.62□□□□□ -0.55
DNMT1-229ENST00000593049 PLECQ15149 4684 aaKnown RBP11.62□□□□□ -0.55
DNMT1-229ENST00000593049 TRAV21A0A0B4J279 112 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 C1QBP02746 253 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 P0DMU3 169 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 FAM231AP0DMU4 169 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 FAM231CP0DMU5 169 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 TCL1AP56279 114 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 EIF5AL1Q6IS14 154 aaKnown RBP11.61□□□□□ -0.55
DNMT1-229ENST00000593049 FAM159AQ6UWV7 190 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 C11orf72Q8NBR9 251 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 GSN-AS1Q9NRJ2 163 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 SACSQ9NZJ4 4579 aa11.61□□□□□ -0.55
DNMT1-229ENST00000593049 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 F5H768 121 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 IFNA7P01567 189 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 PPT1P50897 306 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 FGF8P55075 233 aaPredicted RBP11.6□□□□□ -0.55
DNMT1-229ENST00000593049 ZNF415Q09FC8 603 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 TMEM88Q6PEY1 159 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 TMEM75Q8N9X5 138 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 TMPRSS5Q9H3S3 457 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 PSG8Q9UQ74 426 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
DNMT1-229ENST00000593049 RYR3Q15413 4870 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 TRGV11A0A075B6L2 103 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 FHITP49789 147 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 UBE2G2P60604 165 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-229ENST00000593049 TDRG1Q3Y452 100 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 LGALSLQ3ZCW2 172 aaPredicted RBP11.59□□□□□ -0.55
DNMT1-229ENST00000593049 ZFP69Q49AA0 526 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 SAPCD1Q5SSQ6 148 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 AKAP14Q86UN6 197 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 FAM213BQ8TBF2 198 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 HIST1H2BAQ96A08 127 aa11.59□□□□□ -0.55
DNMT1-229ENST00000593049 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 F6UZH7 168 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 GAGE7O76087 117 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 RAB5CP51148 216 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 LGALS9BQ3B8N2 356 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 C18orf15Q96N68 181 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
DNMT1-229ENST00000593049 TRGV2A0A075B6R0 118 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 PEX7O00628 323 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 SMUG1Q53HV7 270 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 MUC21Q5SSG8 566 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 Q6ZQT7 251 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 Q6ZTI0 123 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 SFT2D1Q8WV19 159 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 TVP23CQ96ET8 276 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 KCNS1Q96KK3 526 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 SPXQ9BT56 116 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 TP53TG3Q9ULZ0 132 aa11.57□□□□□ -0.56
DNMT1-229ENST00000593049 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 TRGV1A0A0A0MS02 117 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 SPINK4O60575 86 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 H2AFB1P0C5Y9 115 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 POM121L12Q8N7R1 296 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 NAGKQ9UJ70 344 aa11.56□□□□□ -0.56
DNMT1-229ENST00000593049 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
DNMT1-229ENST00000593049 TMEM183BQ1AE95 376 aa11.55□□□□□ -0.56
DNMT1-229ENST00000593049 RNF212Q495C1 297 aa11.55□□□□□ -0.56
DNMT1-229ENST00000593049 CST9LP1Q5W188 147 aa11.55□□□□□ -0.56
DNMT1-229ENST00000593049 SLC51BQ86UW2 128 aa11.55□□□□□ -0.56
DNMT1-229ENST00000593049 TMEM183AQ8IXX5 376 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms