RNA–Protein interactions for RNA: ENST00000589146.5

CAPNS1-207, Transcript of calpain small subunit 1, humanhuman

TSL 3 BASIC

Gene CAPNS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-207ENST00000589146 ODF3Q96PU9 254 aa17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 SAV1Q9H4B6 383 aaPredicted RBP17.03■□□□□ 0.32
CAPNS1-207ENST00000589146 TMEM189A5PLL7 270 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 F6UB75 175 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 DEFB1P60022 68 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 PSMG4Q5JS54 123 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 ATP5L2Q7Z4Y8 100 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 ZFAND2AQ8N6M9 145 aa17.02■□□□□ 0.32
CAPNS1-207ENST00000589146 A0A0J9YX75 114 aa17.01■□□□□ 0.31
CAPNS1-207ENST00000589146 SPAG8Q99932 426 aaPredicted RBP17.01■□□□□ 0.31
CAPNS1-207ENST00000589146 GNB1LQ9BYB4 327 aa17.01■□□□□ 0.31
CAPNS1-207ENST00000589146 XKRY2A2RUG3 117 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 LINC01559Q495D7 138 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 CD300EQ496F6 205 aaPredicted RBP17■□□□□ 0.31
CAPNS1-207ENST00000589146 Q6AWC8 147 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 WDR73Q6P4I2 378 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 FOXI2Q6ZQN5 318 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 ZFP82Q8N141 532 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 C2CD3Q4AC94 2353 aa17■□□□□ 0.31
CAPNS1-207ENST00000589146 DUSP14O95147 198 aaKnown RBP16.99■□□□□ 0.31
CAPNS1-207ENST00000589146 A0A1B0GXF2 115 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 OR4C46A6NHA9 309 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 MT-ND6P03923 174 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 EBLN2Q6P2I7 272 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 ZNF575Q86XF7 245 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 FRZBQ92765 325 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 TRAPPC1Q9Y5R8 145 aa16.98■□□□□ 0.31
CAPNS1-207ENST00000589146 LOC105371267A0A1B0GV96 52 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 FRMD6-AS1P0C7T7 363 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 GZMBP10144 247 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 PRR9Q5T870 116 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 TMEM136Q6ZRR5 245 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 OR2K2Q8NGT1 345 aa16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 ZNF256Q9Y2P7 627 aaPredicted RBP16.97■□□□□ 0.31
CAPNS1-207ENST00000589146 A8MTW9 85 aa16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 KLLNB2CW77 178 aa16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 GDF5OSQ5U4N7 250 aa16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 MRPL54Q6P161 138 aaKnown RBP16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 PGLYRP4Q96LB8 373 aa16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 CITED1Q99966 193 aa16.96■□□□□ 0.31
CAPNS1-207ENST00000589146 SPINK4O60575 86 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BKO60814 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BJP06899 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 TRGC1P0CF51 173 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BOP23527 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BBP33778 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 LEPP41159 167 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BDP58876 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BCP62807 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 FABP9Q0Z7S8 132 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST2H2BEQ16778 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 LINC00482Q8N8I6 264 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BHQ93079 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BNQ99877 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 HIST1H2BMQ99879 126 aa16.95■□□□□ 0.3
CAPNS1-207ENST00000589146 TRAV21A0A0B4J279 112 aa16.94■□□□□ 0.3
CAPNS1-207ENST00000589146 ORM1P02763 201 aa16.94■□□□□ 0.3
CAPNS1-207ENST00000589146 IGLC6P0CF74 106 aa16.94■□□□□ 0.3
CAPNS1-207ENST00000589146 C11orf21Q9P2W6 132 aa16.94■□□□□ 0.3
CAPNS1-207ENST00000589146 IGKV3D-20A0A0C4DH25 116 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 SNURFLB1AK76 121 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 IGLV1-51P01701 117 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 HLA-DQA1P01909 254 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 GPX1P07203 203 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 DEFB131AP59861 70 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 MRPL18Q9H0U6 180 aaKnown RBP16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 MAP6D1Q9H9H5 199 aa16.93■□□□□ 0.3
CAPNS1-207ENST00000589146 A0A1B0GW15 77 aa16.92■□□□□ 0.3
CAPNS1-207ENST00000589146 CD33P20138 364 aa16.92■□□□□ 0.3
CAPNS1-207ENST00000589146 CTRLP40313 264 aa16.92■□□□□ 0.3
CAPNS1-207ENST00000589146 HBBP68871 147 aa16.92■□□□□ 0.3
CAPNS1-207ENST00000589146 GATD1Q8NB37 220 aa16.92■□□□□ 0.3
CAPNS1-207ENST00000589146 TMSB15BA0A087X1C1 80 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 A0A1B0GUT8 65 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 HLA-DRB4P13762 266 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 RIGQ13278 110 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 AMTNQ6UX39 209 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 HLA-DRB4X5D2U9 266 aa16.91■□□□□ 0.3
CAPNS1-207ENST00000589146 SETD2Q9BYW2 2564 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 C5orf52A6NGY3 159 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 SAP30O75446 220 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 PF4P02776 101 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 TSPOP30536 169 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 CMC4P56277 68 aaPredicted RBP16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 FER1L6-AS1Q8NA97 138 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 CLUHP3Q96NS8 147 aa16.9■□□□□ 0.3
CAPNS1-207ENST00000589146 H3BMM0 161 aa16.89■□□□□ 0.29
CAPNS1-207ENST00000589146 S100A6P06703 90 aa16.89■□□□□ 0.29
CAPNS1-207ENST00000589146 RNASE4P34096 147 aaKnown RBP16.89■□□□□ 0.29
CAPNS1-207ENST00000589146 LYZL1Q6UWQ5 148 aa16.89■□□□□ 0.29
CAPNS1-207ENST00000589146 CNFNQ9BYD5 112 aa16.89■□□□□ 0.29
CAPNS1-207ENST00000589146 S100A8P05109 93 aa16.88■□□□□ 0.29
CAPNS1-207ENST00000589146 Q6ZQT7 251 aa16.88■□□□□ 0.29
CAPNS1-207ENST00000589146 BORCS7Q96B45 105 aa16.88■□□□□ 0.29
CAPNS1-207ENST00000589146 C7orf71A4D174 169 aa16.87■□□□□ 0.29
CAPNS1-207ENST00000589146 KNCNA6PVL3 124 aa16.87■□□□□ 0.29
CAPNS1-207ENST00000589146 F2Z2F3 143 aa16.87■□□□□ 0.29
CAPNS1-207ENST00000589146 ARMS2P0C7Q2 107 aa16.87■□□□□ 0.29
CAPNS1-207ENST00000589146 RAB4BP61018 213 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms