RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 GKN2Q86XP6 184 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 SMIM20Q8N5G0 67 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 RAB37Q96AX2 223 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 PRRT1Q99946 306 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 CACYBPQ9HB71 228 aaKnown RBP0.76□□□□□ -2.29
SMAD4-207ENST00000589076 TNFSF18Q9UNG2 199 aa0.76□□□□□ -2.29
SMAD4-207ENST00000589076 RFX7Q2KHR2 1363 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 TRAV27A0A087WT01 109 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 OR2T8A6NH00 312 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 E5RI56 91 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 TAS2R41P59536 307 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 VBP1P61758 197 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 Q8TAT8 98 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 PLEKHB2Q96CS7 222 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 HYLS1Q96M11 299 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 GGACTQ9BVM4 153 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 CCDC94Q9BW85 323 aaPredicted RBP0.75□□□□□ -2.29
SMAD4-207ENST00000589076 BIN3Q9NQY0 253 aa0.75□□□□□ -2.29
SMAD4-207ENST00000589076 EHBP1L1Q8N3D4 1523 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 CITO14578 2027 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 LRP1BQ9NZR2 4599 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 hDV103S1A0JD37 113 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 TMEM238C9JI98 176 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 K7ERJ3 54 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 RER1O15258 196 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 CSN2P05814 226 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 C1orf140Q5VVS0 124 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 TMEM14EPQ6UXP3 125 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 Q8N6K4 173 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 OR10AG1Q8NH19 301 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 TMEM138Q9NPI0 162 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 SLIT1O75093 1534 aa0.74□□□□□ -2.29
SMAD4-207ENST00000589076 XIRP1Q702N8 1843 aaKnown RBP0.73□□□□□ -2.29
SMAD4-207ENST00000589076 HRNRQ86YZ3 2850 aaPredicted RBP0.73□□□□□ -2.29
SMAD4-207ENST00000589076 ODAMA1E959 279 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 GPR31O00270 319 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 KLF7O75840 302 aaPredicted RBP0.73□□□□□ -2.29
SMAD4-207ENST00000589076 PIAS1O75925 651 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 EFNA4P52798 201 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 CROCCP2Q86T23 111 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 LRRC18Q8N456 261 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 STX19Q8N4C7 294 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 HOPXQ9BPY8 73 aaPredicted RBP0.73□□□□□ -2.29
SMAD4-207ENST00000589076 OR2H1Q9GZK4 316 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 BOLA2Q9H3K6 86 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 GID8Q9NWU2 228 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 IL20Q9NYY1 176 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 LAMTOR3Q9UHA4 124 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 UFC1Q9Y3C8 167 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 MED12Q93074 2177 aa0.73□□□□□ -2.29
SMAD4-207ENST00000589076 ERBINQ96RT1 1412 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 A0A1W2PPM0 123 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 LYRM1O43325 122 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 SERPINB1P30740 379 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 RPL35P42766 123 aaKnown RBP0.72□□□□□ -2.29
SMAD4-207ENST00000589076 HBBP68871 147 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 MSMO1Q15800 293 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 FKBP1CQ5VVH2 108 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 PHF5AQ7RTV0 110 aaKnown RBP0.72□□□□□ -2.29
SMAD4-207ENST00000589076 DEFB123Q8N688 67 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 TET1Q8NFU7 2136 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 NEK7Q8TDX7 302 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 PSMF1Q92530 271 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 ZC2HC1AQ96GY0 325 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 HSPB8Q9UJY1 196 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 MRC2Q9UBG0 1479 aa0.72□□□□□ -2.29
SMAD4-207ENST00000589076 PPP5D1E7EU14 171 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 CST7O76096 145 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 GLRXP35754 106 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 EIF3IQ13347 325 aaKnown RBP0.71□□□□□ -2.3
SMAD4-207ENST00000589076 RTL8BQ17RB0 113 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 TRIQKQ629K1 86 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 C3orf33Q6P1S2 294 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 LINC00575Q6W349 94 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 FAM24BQ8N5W8 94 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 ASB4Q9Y574 426 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 TECPR2O15040 1411 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 KIAA1107Q9UPP5 1409 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 KIAA1549LQ6ZVL6 1849 aa0.71□□□□□ -2.3
SMAD4-207ENST00000589076 RTL9Q8NET4 1388 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 HECTD4Q9Y4D8 3996 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 C9orf170A2RU37 121 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 JMJD7-PLA2G4BH0Y9G9 81 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 H3BQV1 296 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 PPYP01298 95 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 IGLV3-1P01715 115 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 IDO1P14902 403 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 CRYBA4P53673 196 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 CIRBPQ14011 172 aaKnown RBP0.7□□□□□ -2.3
SMAD4-207ENST00000589076 LTC4SQ16873 150 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 LELP1Q5T871 98 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 PPP1R2P3Q6NXS1 205 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 PRR15Q8IV56 129 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 FAM216BQ8N7L0 139 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 MCEEQ96PE7 176 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 TRAPPC8Q9Y2L5 1435 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 DNAH7Q8WXX0 4024 aa0.7□□□□□ -2.3
SMAD4-207ENST00000589076 DOPEY2Q9Y3R5 2298 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 CLASP1Q7Z460 1538 aa0.69□□□□□ -2.3
SMAD4-207ENST00000589076 MED13LQ71F56 2210 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms