RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 OVOL1O14753 267 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF705DP0CH99 300 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-204ENST00000586417 ZNF705BP0CI00 300 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-204ENST00000586417 DEFB1P60022 68 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 RPL19P84098 196 aaKnown RBP15.34■□□□□ 0.05
ATG4D-204ENST00000586417 FABP9Q0Z7S8 132 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 SMUG1Q53HV7 270 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 OR9G4Q8NGQ1 327 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 ANK2Q01484 3957 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 FAM231BA6NCW3 169 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 C5orf52A6NGY3 159 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 SNRPEP62304 92 aaKnown RBP15.34■□□□□ 0.05
ATG4D-204ENST00000586417 MRPL54Q6P161 138 aaKnown RBP15.34■□□□□ 0.05
ATG4D-204ENST00000586417 TRAPPC1Q9Y5R8 145 aa15.34■□□□□ 0.05
ATG4D-204ENST00000586417 GZMBP10144 247 aa15.33■□□□□ 0.04
ATG4D-204ENST00000586417 PEMTQ9UBM1 199 aa15.33■□□□□ 0.04
ATG4D-204ENST00000586417 PKD1L1Q8TDX9 2849 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 K7EQG2 157 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 S100A6P06703 90 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 ID1P41134 155 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 RIPPLY3P57055 190 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 WFDC3Q8IUB2 231 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 GNB1LQ9BYB4 327 aa15.32■□□□□ 0.04
ATG4D-204ENST00000586417 F6UB75 175 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 M0QZ24 198 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 CSN3P07498 182 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 FOXA3P55318 350 aaPredicted RBP15.31■□□□□ 0.04
ATG4D-204ENST00000586417 TMEM136Q6ZRR5 245 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 OR8A1Q8NGG7 326 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 RBPMS2Q6ZRY4 209 aaKnown RBP15.31■□□□□ 0.04
ATG4D-204ENST00000586417 OR10J6PQ8NGY7 276 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 LINC00477Q96M19 166 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 SAV1Q9H4B6 383 aaPredicted RBP15.31■□□□□ 0.04
ATG4D-204ENST00000586417 LENEPQ9Y5L5 61 aa15.31■□□□□ 0.04
ATG4D-204ENST00000586417 A0A1B0GXF2 115 aa15.3■□□□□ 0.04
ATG4D-204ENST00000586417 SNURFLB1AK76 121 aa15.3■□□□□ 0.04
ATG4D-204ENST00000586417 TFPI2P48307 235 aa15.3■□□□□ 0.04
ATG4D-204ENST00000586417 RASL11AQ6T310 242 aa15.3■□□□□ 0.04
ATG4D-204ENST00000586417 COX19Q49B96 90 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 WDR73Q6P4I2 378 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 ATP5L2Q7Z4Y8 100 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 ZNF575Q86XF7 245 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 PGLYRP4Q96LB8 373 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 MRPL18Q9H0U6 180 aaKnown RBP15.29■□□□□ 0.04
ATG4D-204ENST00000586417 TMEM189A5PLL7 270 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 FABP5P3A8MUU1 101 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 NDUFA6P56556 154 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 SHISA2Q6UWI4 295 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 FAM19A4Q96LR4 140 aa15.29■□□□□ 0.04
ATG4D-204ENST00000586417 UBE2CO00762 179 aa15.28■□□□□ 0.04
ATG4D-204ENST00000586417 MT-ND6P03923 174 aa15.28■□□□□ 0.04
ATG4D-204ENST00000586417 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
ATG4D-204ENST00000586417 GDF5OSQ5U4N7 250 aa15.28■□□□□ 0.04
ATG4D-204ENST00000586417 SPATA3Q8NHX4 192 aa15.28■□□□□ 0.04
ATG4D-204ENST00000586417 ZNF688P0C7X2 276 aa15.27■□□□□ 0.04
ATG4D-204ENST00000586417 PRR9Q5T870 116 aa15.27■□□□□ 0.04
ATG4D-204ENST00000586417 ZFAND2AQ8N6M9 145 aa15.27■□□□□ 0.04
ATG4D-204ENST00000586417 TMSB15BA0A087X1C1 80 aa15.26■□□□□ 0.03
ATG4D-204ENST00000586417 SNRPD3P62318 126 aaKnown RBP15.26■□□□□ 0.03
ATG4D-204ENST00000586417 LINC01559Q495D7 138 aa15.26■□□□□ 0.03
ATG4D-204ENST00000586417 PSMG4Q5JS54 123 aa15.26■□□□□ 0.03
ATG4D-204ENST00000586417 C11orf21Q9P2W6 132 aa15.26■□□□□ 0.03
ATG4D-204ENST00000586417 HLA-DQA1P01909 254 aa15.25■□□□□ 0.03
ATG4D-204ENST00000586417 PF4P02776 101 aa15.25■□□□□ 0.03
ATG4D-204ENST00000586417 TRBV7-9A0A0J9YWB2 115 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 XKRY2A2RUG3 117 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 HOXA5P20719 270 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 RAB4BP61018 213 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 PAFAH1B2P68402 229 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 HBBP68871 147 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 Q6AWC8 147 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 TMEM61Q8N0U2 210 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 RPS20P60866 119 aaKnown RBP15.24■□□□□ 0.03
ATG4D-204ENST00000586417 DEFB114Q30KQ6 69 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 Q6ZQT7 251 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 APRG1Q8IVJ8 170 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 LINC00482Q8N8I6 264 aa15.24■□□□□ 0.03
ATG4D-204ENST00000586417 TRAV2A0A0B4J234 112 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 ORM1P02763 201 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 ARMS2P0C7Q2 107 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 CRISP2P16562 243 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 CAMPP49913 170 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 COA6Q5JTJ3 125 aaKnown RBP15.23■□□□□ 0.03
ATG4D-204ENST00000586417 DYNLRB2Q8TF09 96 aa15.23■□□□□ 0.03
ATG4D-204ENST00000586417 NOTCH3Q9UM47 2321 aa15.22■□□□□ 0.03
ATG4D-204ENST00000586417 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
ATG4D-204ENST00000586417 A0A0J9YX75 114 aa15.22■□□□□ 0.03
ATG4D-204ENST00000586417 IGLC6P0CF74 106 aa15.22■□□□□ 0.03
ATG4D-204ENST00000586417 SLAQ13239 276 aa15.22■□□□□ 0.03
ATG4D-204ENST00000586417 A0A1B0GUT8 65 aa15.21■□□□□ 0.03
ATG4D-204ENST00000586417 GFI1BQ5VTD9 330 aa15.21■□□□□ 0.03
ATG4D-204ENST00000586417 CMYA5Q8N3K9 4069 aa15.21■□□□□ 0.03
ATG4D-204ENST00000586417 CD33P20138 364 aa15.21■□□□□ 0.02
ATG4D-204ENST00000586417 LYZL1Q6UWQ5 148 aa15.21■□□□□ 0.02
ATG4D-204ENST00000586417 SIGLEC8Q9NYZ4 499 aa15.21■□□□□ 0.02
ATG4D-204ENST00000586417 APCSP02743 223 aa15.2■□□□□ 0.02
ATG4D-204ENST00000586417 CTRLP40313 264 aa15.2■□□□□ 0.02
ATG4D-204ENST00000586417 KIR3DS1Q14943 382 aa15.2■□□□□ 0.02
ATG4D-204ENST00000586417 CD300EQ496F6 205 aaPredicted RBP15.2■□□□□ 0.02
ATG4D-204ENST00000586417 TPPP3Q9BW30 176 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms