RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SSX7Q7RTT5 188 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 CMTM2Q8TAZ6 248 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 C18orf15Q96N68 181 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 NEU1Q99519 415 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 VGLL1Q99990 258 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 AGPAT4-IT1Q9H0P7 198 aa7.15□□□□□ -1.26
GGA3-219ENST00000584550 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 BCL2L11O43521 198 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 NUDT3O95989 172 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 STAG3L2P0CL84 134 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 STAG3L3P0CL85 134 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 FAM74A1Q5RGS3 127 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 TMEM78Q5T7P6 136 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 TMUB2Q71RG4 321 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 AKAP14Q86UN6 197 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 LINC00477Q96M19 166 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 OTORQ9NRC9 128 aa7.14□□□□□ -1.27
GGA3-219ENST00000584550 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
GGA3-219ENST00000584550 VPS13BQ7Z7G8 4022 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 CXorf1O96002 111 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 SLC25A5P05141 298 aaKnown RBP7.13□□□□□ -1.27
GGA3-219ENST00000584550 AZU1P20160 251 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 RNASE4P34096 147 aaKnown RBP7.13□□□□□ -1.27
GGA3-219ENST00000584550 FGF8P55075 233 aaPredicted RBP7.13□□□□□ -1.27
GGA3-219ENST00000584550 DAD1P61803 113 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 GNG5P63218 68 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 ZNF726P1Q15940 193 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 TCTE3Q8IZS6 198 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 Q8TAT8 98 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 RXFP4Q8TDU9 374 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 MDFICQ9P1T7 246 aa7.13□□□□□ -1.27
GGA3-219ENST00000584550 YTHDF2Q9Y5A9 579 aaKnown RBP7.13□□□□□ -1.27
GGA3-219ENST00000584550 CTXND1A0A1B0GTU2 59 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 DIRC3C9JPN6 131 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 J3QL48 77 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 SMR3BP02814 79 aaPredicted RBP7.12□□□□□ -1.27
GGA3-219ENST00000584550 GPX1P07203 203 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 ZNF138P52744 262 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 XGP55808 180 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 TAS2R60P59551 318 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 BTN1A1Q13410 526 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 NDUFA5Q16718 116 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 C9orf47Q6ZRZ4 202 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 GOLT1AQ6ZVE7 132 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 TMEM256Q8N2U0 113 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 FRZBQ92765 325 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 ODF3Q96PU9 254 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 TMPRSS5Q9H3S3 457 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 TMEM167BQ9NRX6 74 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
GGA3-219ENST00000584550 TEX48A0A1B0GUV7 120 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 A0A1B0GV50 99 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 C7orf71A4D174 169 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 MAP1LC3B2A6NCE7 125 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 H7BYZ3 331 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 FHITP49789 147 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 CCL18P55774 89 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 UBE2G2P60604 165 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 SUMO1P63165 101 aaKnown RBP7.11□□□□□ -1.27
GGA3-219ENST00000584550 EIF5AP63241 154 aaKnown RBP7.11□□□□□ -1.27
GGA3-219ENST00000584550 CD300CQ08708 224 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 LGALSLQ3ZCW2 172 aaPredicted RBP7.11□□□□□ -1.27
GGA3-219ENST00000584550 CCDC28AQ8IWP9 274 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 FAM213BQ8TBF2 198 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 SGK494Q96LW2 274 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 KRTAP1-5Q9BYS1 174 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 MAP1LC3BQ9GZQ8 125 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 ZNF492Q9P255 531 aa7.11□□□□□ -1.27
GGA3-219ENST00000584550 TRAV8-1A0A0A6YYK1 113 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 RBAKDNA6NC62 111 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 F5H768 121 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 C1QBP02746 253 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 SEC11BP0C7V7 166 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
GGA3-219ENST00000584550 PRR9Q5T870 116 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 ZFAND2AQ8N6M9 145 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 TMED6Q8WW62 240 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 FAM19A4Q96LR4 140 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 C20orf144Q9BQM9 153 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 Q9H8V8 135 aa7.1□□□□□ -1.27
GGA3-219ENST00000584550 KLLNB2CW77 178 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 GGTLC3B5MD39 225 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 IFNA7P01567 189 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 DEFB130BP0DP73 79 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 DEFB130AP0DP74 79 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 CRISP2P16562 243 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 S100A1P23297 94 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 Q6ZQT7 251 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 STOML3Q8TAV4 291 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 SUN5Q8TC36 379 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 SFT2D1Q8WV19 159 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 C16orf74Q96GX8 76 aa7.09□□□□□ -1.27
GGA3-219ENST00000584550 CBY3A6NI87 242 aa7.08□□□□□ -1.28
GGA3-219ENST00000584550 UMAD1C9J7I0 102 aa7.08□□□□□ -1.28
GGA3-219ENST00000584550 RGS13O14921 159 aa7.08□□□□□ -1.28
GGA3-219ENST00000584550 ZNF324O75467 553 aaPredicted RBP7.08□□□□□ -1.28
GGA3-219ENST00000584550 TCRAP04437 139 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms