RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PSMG4Q5JS54 123 aa9.4□□□□□ -0.9
SRSF1-204ENST00000581979 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
SRSF1-204ENST00000581979 DEFB1P60022 68 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 HIST1H1AQ02539 215 aaPredicted RBP9.39□□□□□ -0.91
SRSF1-204ENST00000581979 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 SMUG1Q53HV7 270 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 FAM210BQ96KR6 192 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 TRBV24-1A0A075B6N3 115 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 F6UB75 175 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 CA1P00915 261 aaPredicted RBP9.39□□□□□ -0.91
SRSF1-204ENST00000581979 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
SRSF1-204ENST00000581979 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 RPS10P46783 165 aaKnown RBP9.38□□□□□ -0.91
SRSF1-204ENST00000581979 TCL1AP56279 114 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 CD300EQ496F6 205 aaPredicted RBP9.38□□□□□ -0.91
SRSF1-204ENST00000581979 FAM162BQ5T6X4 162 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 COX8CQ7Z4L0 72 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 OR4B1Q8NGF8 309 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
SRSF1-204ENST00000581979 SH2D1AO60880 128 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 SAP30O75446 220 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 CRIP1P50238 77 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 OR2D3Q8NGH3 330 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 ZMAT5Q9UDW3 170 aaKnown RBP9.37□□□□□ -0.91
SRSF1-204ENST00000581979 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
SRSF1-204ENST00000581979 TRAV9-1A0A075B6T8 112 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 TRAV25A0A0B4J276 109 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 A8MWL6 223 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 CT83Q5H943 113 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 EBLN2Q6P2I7 272 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 TSKUQ8WUA8 353 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 ZNF80P51504 273 aaPredicted RBP9.36□□□□□ -0.91
SRSF1-204ENST00000581979 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
SRSF1-204ENST00000581979 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
SRSF1-204ENST00000581979 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
SRSF1-204ENST00000581979 IZUMO1RA6ND01 250 aa9.35□□□□□ -0.91
SRSF1-204ENST00000581979 FABP5P3A8MUU1 101 aa9.35□□□□□ -0.91
SRSF1-204ENST00000581979 RPL19P84098 196 aaKnown RBP9.35□□□□□ -0.91
SRSF1-204ENST00000581979 GDF5OSQ5U4N7 250 aa9.35□□□□□ -0.91
SRSF1-204ENST00000581979 NEU1Q99519 415 aa9.35□□□□□ -0.91
SRSF1-204ENST00000581979 A0A0J9YX75 114 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 J3KRW8 73 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 SPINK4O60575 86 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 DEFB131AP59861 70 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 SAV1Q9H4B6 383 aaPredicted RBP9.34□□□□□ -0.91
SRSF1-204ENST00000581979 SRD5A3Q9H8P0 318 aa9.34□□□□□ -0.91
SRSF1-204ENST00000581979 DUSP14O95147 198 aaKnown RBP9.34□□□□□ -0.92
SRSF1-204ENST00000581979 TYMSP04818 313 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 GZMBP10144 247 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 C9orf66Q5T8R8 295 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 B9D2Q9BPU9 175 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.92
SRSF1-204ENST00000581979 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 TRBV7-9A0A0J9YWB2 115 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 XKRY2A2RUG3 117 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 HIGD1CA8MV81 97 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 ORM1P02763 201 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 GPX1P07203 203 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
SRSF1-204ENST00000581979 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
SRSF1-204ENST00000581979 FAM231BA6NCW3 169 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 RAB5BP61020 215 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 PRR9Q5T870 116 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 MRPL54Q6P161 138 aaKnown RBP9.32□□□□□ -0.92
SRSF1-204ENST00000581979 ZFP82Q8N141 532 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 ZFAND2AQ8N6M9 145 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 PGLYRP4Q96LB8 373 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 ZNF256Q9Y2P7 627 aaPredicted RBP9.32□□□□□ -0.92
SRSF1-204ENST00000581979 DNAH9Q9NYC9 4486 aa9.32□□□□□ -0.92
SRSF1-204ENST00000581979 KNCNA6PVL3 124 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 IGLV1-51P01701 117 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 TRGC2P03986 189 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 CRISP2P16562 243 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 RNASE4P34096 147 aaKnown RBP9.31□□□□□ -0.92
SRSF1-204ENST00000581979 LEPP41159 167 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 TRAV21A0A0B4J279 112 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 INSL3P51460 131 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 ODF3Q96PU9 254 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 TPPP3Q9BW30 176 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 TRAPPC1Q9Y5R8 145 aa9.31□□□□□ -0.92
SRSF1-204ENST00000581979 COX19Q49B96 90 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms