RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 BAALCQ8WXS3 180 aa4.03□□□□□ -1.76
PPP4R1-216ENST00000580283 TMEM222Q9H0R3 208 aa4.03□□□□□ -1.76
PPP4R1-216ENST00000580283 RBKSQ9H477 322 aa4.03□□□□□ -1.76
PPP4R1-216ENST00000580283 MRPL16Q9NX20 251 aaKnown RBP4.03□□□□□ -1.76
PPP4R1-216ENST00000580283 U3KQ87 197 aa4.03□□□□□ -1.76
PPP4R1-216ENST00000580283 TRAV5A0A0B4J249 113 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 RNF222A6NCQ9 220 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 PANO1I0J062 215 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 IGHV3-30P01768 117 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 IGHV3-33P01772 117 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 IGHV3-30-3P0DP02 117 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 IGHV3-30-5P0DP03 117 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 TGFBR1P36897 503 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 TCL1AP56279 114 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 IQCF2Q8IXL9 164 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 LGI3Q8N145 548 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 BLNKQ8WV28 456 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 S100A16Q96FQ6 103 aaKnown RBP4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 DNAJC30Q96LL9 226 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 GPR82Q96P67 336 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 RTBDNQ9BSG5 229 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 SHANK2-AS3Q9BTD1 123 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 PAXXQ9BUH6 204 aa4.02□□□□□ -1.77
PPP4R1-216ENST00000580283 SLC17A3O00476 420 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 ATG12O94817 140 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 SRIP30626 198 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 RCVRNP35243 200 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 SLAQ13239 276 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 ASAH1Q13510 395 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 ACOT6Q3I5F7 207 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 DTD1Q8TEA8 209 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 RBPMSQ93062 196 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 SLC35E1Q96K37 410 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 FAM19A4Q96LR4 140 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 LINC01600Q96MT4 127 aa4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 ZNF331Q9NQX6 463 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-216ENST00000580283 RBFOX3A6NFN3 312 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 H3BTX0 84 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 GABARAPH6UMI1 98 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 GABARAPO95166 117 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 CFDP00746 253 aaPredicted RBP4□□□□□ -1.77
PPP4R1-216ENST00000580283 AQP4P55087 323 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 BTN1A1Q13410 526 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 PRR9Q5T870 116 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 ACOT7LQ6ZUV0 252 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 NRARPQ7Z6K4 114 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 EIF4E3Q8N5X7 224 aaKnown RBP4□□□□□ -1.77
PPP4R1-216ENST00000580283 OR13C8Q8NGS7 320 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 RNASE11Q8TAA1 199 aaKnown RBP4□□□□□ -1.77
PPP4R1-216ENST00000580283 MARCH1Q8TCQ1 289 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 JPT2Q9H910 190 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 SSR3Q9UNL2 185 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 TMEM56-RWDD3S4R434 201 aa4□□□□□ -1.77
PPP4R1-216ENST00000580283 TRGV4A0A0C4DH28 118 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 KLLNB2CW77 178 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 CD3DP04234 171 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 FABP1P07148 127 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 SULT1A3P0DMM9 295 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 SULT1A4P0DMN0 295 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 RPL7P18124 248 aaKnown RBP3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 PLP1P60201 277 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 ERCC8Q13216 396 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 ZNF846Q147U1 533 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 TDRG1Q3Y452 100 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 UBE2NLQ5JXB2 153 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 SAMD12Q8N8I0 201 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 ZNF680Q8NEM1 530 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 BPIFCQ8NFQ6 507 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 OR10G4Q8NGN3 311 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 TERB2Q8NHR7 220 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 ODF3Q96PU9 254 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 TMEM147Q9BVK8 224 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 COPZ2Q9P299 210 aa3.99□□□□□ -1.77
PPP4R1-216ENST00000580283 C7orf71A4D174 169 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 H3BQ15 152 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 PITX3O75364 302 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 B3GALNT1O75752 331 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 ORM1P02763 201 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 LEPP41159 167 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 ATP5IP56385 69 aaPredicted RBP3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 LAGE3Q14657 143 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 GPR107Q5VW38 600 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 LYZL2Q7Z4W2 148 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 DAZ4Q86SG3 579 aaKnown RBP3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 OR10P1Q8NGE3 313 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 OR1S1Q8NH92 325 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 LRRC20Q8TCA0 184 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 TXNDC17Q9BRA2 123 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 SLC25A31Q9H0C2 315 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 NAA60Q9H7X0 242 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 DAZ3Q9NR90 486 aaKnown RBP3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 HIGD1AQ9Y241 93 aa3.98□□□□□ -1.77
PPP4R1-216ENST00000580283 LOC100506127A0A0U1RQW1 187 aa3.97□□□□□ -1.77
PPP4R1-216ENST00000580283 CRYM-AS1A6NIL9 109 aa3.97□□□□□ -1.77
PPP4R1-216ENST00000580283 HYPMO75409 117 aa3.97□□□□□ -1.77
PPP4R1-216ENST00000580283 IAPPP10997 89 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms