RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CFC1P0CG37 223 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 GPR179Q6PRD1 2367 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 E7EQL1 145 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE5Q13069 117 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 GAGE6Q13070 117 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 CACNA1BQ00975 2339 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 TRBV25-1A0A075B6N4 114 aa8.54□□□□□ -1.04
SEC22B-201ENST00000578049 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 INS-IGF2F8WCM5 200 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 COL8A2P25067 703 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 PRSS47A8MTI9 375 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 ANKRD29Q8N6D5 301 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 ZNF407Q9C0G0 2248 aa8.53□□□□□ -1.04
SEC22B-201ENST00000578049 ZNF134P52741 427 aa8.52□□□□□ -1.04
SEC22B-201ENST00000578049 CCL25O15444 150 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 TRPM7Q96QT4 1865 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 THADAQ6YHU6 1953 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 ABCA4P78363 2273 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 IGHV3-73A0A0B4J1V6 119 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 ANXA2RQ3ZCQ2 193 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.52□□□□□ -1.051e-8■□□□□ 8.4
SEC22B-201ENST00000578049 KRTAP27-1Q3LI81 207 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 TRACP01848 142 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 SAP30O75446 220 aa8.52□□□□□ -1.05
SEC22B-201ENST00000578049 A0A1W2PRX2 142 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 DOCK10Q96BY6 2186 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 ZNF524Q96C55 264 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 TMEM243Q9BU79 118 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 DKK2Q9UBU2 259 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 TRBV6-1A0A0K0K1D8 114 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 FER1L5A0AVI2 2057 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 IGLL5B9A064 214 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 FOXI2Q6ZQN5 318 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 IGFBPL1Q8WX77 278 aa8.51□□□□□ -1.05
SEC22B-201ENST00000578049 FAM120AOSQ5T036 256 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 DIDO1Q9BTC0 2240 aaKnown RBP8.5□□□□□ -1.05
SEC22B-201ENST00000578049 DKK1O94907 266 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 HERV-K104P63124 156 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 NTN5Q8WTR8 489 aaPredicted RBP8.5□□□□□ -1.05
SEC22B-201ENST00000578049 PLXNA2O75051 1894 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 IGHV1-69P01742 117 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 C15orf53Q8NAA6 179 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 TEN1Q86WV5 123 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 SCRT2Q9NQ03 307 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 ARFGEF3Q5TH69 2177 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 C22orf46C9J442 243 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 LINC01356Q8N9X3 169 aa8.5□□□□□ -1.05
SEC22B-201ENST00000578049 MORN5Q5VZ52 161 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 GP9P14770 177 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 CDPF1Q6NVV7 123 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 IGF2BP2-AS1Q96M15 143 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 MSRB2Q9Y3D2 182 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 MALRD1Q5VYJ5 2156 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 USF3Q68DE3 2245 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 SYNJ2BPP57105 145 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 BRD3OSQ6XYD6 125 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
SEC22B-201ENST00000578049 TEX48A0A1B0GUV7 120 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 RBMY1FQ15415 496 aaKnown RBP8.48□□□□□ -1.05
SEC22B-201ENST00000578049 FNDC1Q4ZHG4 1894 aaPredicted RBP8.48□□□□□ -1.05
SEC22B-201ENST00000578049 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 ATP6V0E2Q8NHE4 81 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 BPESC1Q9GZL8 116 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 IGHV7-4-1A0A0J9YVY3 117 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 ZNF503-AS2A6NEH8 195 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 WISP1O95388 367 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 LCNL1Q6ZST4 164 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 RNF152Q8N8N0 203 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 RNF114Q9Y508 228 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 MSMBP08118 114 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 ELANEP08246 267 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
SEC22B-201ENST00000578049 DOCK7Q96N67 2140 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 AGPAT4-IT1Q9H0P7 198 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 MYLKQ15746 1914 aa8.48□□□□□ -1.05
SEC22B-201ENST00000578049 EGR2P11161 476 aaPredicted RBP8.47□□□□□ -1.05
SEC22B-201ENST00000578049 ZNRD1Q9P1U0 126 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 H0YGX0 51 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 K7ERJ3 54 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 SPINK13Q1W4C9 94 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 KLHL30-AS1Q8NEE0 82 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 THSD7BQ9C0I4 1608 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 H3BQ85 93 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 J3QLI3 93 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 IGHV3-53P01767 116 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 C11orf53Q8IXP5 236 aa8.47□□□□□ -1.05
SEC22B-201ENST00000578049 LY6G6EA0A0G2JKS1 128 aa8.46□□□□□ -1.05
SEC22B-201ENST00000578049 MED14OSP0DP75 135 aa8.46□□□□□ -1.05
SEC22B-201ENST00000578049 TMEM258P61165 79 aa8.46□□□□□ -1.05
SEC22B-201ENST00000578049 U3KQA8 63 aa8.46□□□□□ -1.05
SEC22B-201ENST00000578049 TPSG1Q9NRR2 321 aa8.46□□□□□ -1.05
SEC22B-201ENST00000578049 NLRC5Q86WI3 1866 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms