RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TRBV7-1A0A0A6YYK4 115 aa7.25□□□□□ -1.25
CDH8-203ENST00000577390 C9JAW5 83 aa7.25□□□□□ -1.25
CDH8-203ENST00000577390 ZCCHC24Q8N2G6 241 aaKnown RBP7.25□□□□□ -1.25
CDH8-203ENST00000577390 IL17RELQ6ZVW7 336 aa7.25□□□□□ -1.25
CDH8-203ENST00000577390 MUSTN1Q8IVN3 82 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 RNASE7Q9H1E1 156 aaKnown RBP7.24□□□□□ -1.25
CDH8-203ENST00000577390 C17orf100A8MU93 164 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 FAM27BQ5VT28 67 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 TRPT1Q86TN4 253 aaKnown RBP7.24□□□□□ -1.25
CDH8-203ENST00000577390 BRK1Q8WUW1 75 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 SIGLEC9Q9Y336 463 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 SHISA9B4DS77 424 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 CELA3BP08861 270 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 TMEM243Q9BU79 118 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 C14orf178Q8N769 122 aaPredicted RBP7.24□□□□□ -1.25
CDH8-203ENST00000577390 COL5A1P20908 1838 aaPredicted RBP7.24□□□□□ -1.25
CDH8-203ENST00000577390 YPEL1O60688 119 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 CT83Q5H943 113 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 YPEL2Q96QA6 119 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 LINC01619G3V211 115 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 IGHV4-59P01825 116 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 OCC1Q8TAD7 63 aa7.24□□□□□ -1.25
CDH8-203ENST00000577390 LY6G5BQ8NDX9 201 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 R3HDMLQ9H3Y0 253 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 F8P00451 2351 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 A0A1W2PQD3 144 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 DKK1O94907 266 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 NDUFC2O95298 119 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 ATP5G3P48201 142 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 MORN5Q5VZ52 161 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 UTF1Q5T230 341 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 PSG8Q9UQ74 426 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 FAM104BQ5XKR9 115 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 RETNQ9HD89 108 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 RFNGQ9Y644 331 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 CCL3L1P16619 93 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 TFF3Q07654 80 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 RPP25LQ8N5L8 163 aaKnown RBP7.23□□□□□ -1.25
CDH8-203ENST00000577390 IL17DQ8TAD2 202 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 TM2D1Q9BX74 207 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 B9D2Q9BPU9 175 aa7.23□□□□□ -1.25
CDH8-203ENST00000577390 AMELYQ99218 206 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 TMEM133Q9H2Q1 129 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 SPINK13Q1W4C9 94 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 CD177Q8N6Q3 437 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 CECR9P0C854 216 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 LINC01555Q8NAE3 123 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 A4D1N5 150 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 LINC00312Q9Y6C7 94 aa7.22□□□□□ -1.25
CDH8-203ENST00000577390 CENPVL1A0A0U1RR11 272 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 TMEM52Q8NDY8 209 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 TNRC6BQ9UPQ9 1833 aaKnown RBP7.21□□□□□ -1.25
CDH8-203ENST00000577390 H3BMG7 143 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 EFNA4P52798 201 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 FOXE3Q13461 319 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 NABP1Q96AH0 204 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 CAMK2N2Q96S95 79 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 IGHV3-30P01768 117 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 IGHV3-33P01772 117 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 IGHV3-30-3P0DP02 117 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 IGHV3-30-5P0DP03 117 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 TCF15Q12870 199 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 SERP1Q9Y6X1 66 aa7.21□□□□□ -1.25
CDH8-203ENST00000577390 PCP2Q8IVA1 136 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 TMEM190Q8WZ59 177 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 IGLV10-54A0A075B6I4 117 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 LINC01549A6NIU2 74 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 CTRLP40313 264 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 USMG5Q96IX5 58 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 LYZL4Q96KX0 146 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 LIME1Q9H400 295 aa7.21□□□□□ -1.26
CDH8-203ENST00000577390 RPUSD1Q9UJJ7 312 aaKnown RBP7.21□□□□□ -1.26
CDH8-203ENST00000577390 MRPL36Q9P0J6 103 aaKnown RBP7.2□□□□□ -1.26
CDH8-203ENST00000577390 TLN1Q9Y490 2541 aaKnown RBP7.2□□□□□ -1.26
CDH8-203ENST00000577390 ZNRF2Q8NHG8 242 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 SPANXB1Q9NS25 103 aaPredicted RBP7.2□□□□□ -1.26
CDH8-203ENST00000577390 KLK9Q9UKQ9 250 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 K7ERJ3 54 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 D6R8Y8 96 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 EFNB3Q15768 340 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 IGHV1-24A0A0C4DH33 117 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 MIR17HGQ75NE6 70 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
CDH8-203ENST00000577390 CPAMD8Q8IZJ3 1885 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 IGLV1-36A0A0B4J1U3 117 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 PMS2P5A8MQ11 134 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 ZNF721Q8TF20 911 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 SRSF8Q9BRL6 282 aaKnown RBP7.19□□□□□ -1.26
CDH8-203ENST00000577390 DAZ1Q9NQZ3 744 aaKnown RBP7.19□□□□□ -1.26
CDH8-203ENST00000577390 LTBP1Q14766 1721 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 VSIG2Q96IQ7 327 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 SRXN1Q9BYN0 137 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 ZC2HC1AQ96GY0 325 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 A0A1W2PQF6 199 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 IGHMP01871 453 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 IL15RAQ13261 267 aa7.19□□□□□ -1.26
CDH8-203ENST00000577390 IFI6P09912 130 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms