RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 TVP23CQ96ET8 276 aa11.15□□□□□ -0.62
NCBP3-207ENST00000577169 LINC00467Q9BRT7 94 aa11.15□□□□□ -0.62
NCBP3-207ENST00000577169 NOP10Q9NPE3 64 aaKnown RBP11.15□□□□□ -0.62
NCBP3-207ENST00000577169 SERTM2A0A1B0GWG4 89 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 FAM74A7A6NL05 159 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 RGS13O14921 159 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 HTN3P15516 51 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 EIF4E3Q8N5X7 224 aaKnown RBP11.14□□□□□ -0.63
NCBP3-207ENST00000577169 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 STARD9Q9P2P6 4700 aa11.14□□□□□ -0.63
NCBP3-207ENST00000577169 IGHV1OR15-1A0A075B7D0 117 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 CBY3A6NI87 242 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 K7EQM0 130 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 IFNA7P01567 189 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 DPPA3Q6W0C5 159 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 TREM1Q9NP99 234 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 TP53TG3Q9ULZ0 132 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 PSG8Q9UQ74 426 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
NCBP3-207ENST00000577169 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 SNURFLB1AK76 121 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 LY6G6CO95867 125 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 TCTAP57738 103 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 Q6AWC8 147 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 LINC00479Q96M42 142 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 NKX6-2Q9C056 277 aaPredicted RBP11.12□□□□□ -0.63
NCBP3-207ENST00000577169 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
NCBP3-207ENST00000577169 TRAV34A0A0B4J273 112 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 A0A1B0GV50 99 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 H2AFB1P0C5Y9 115 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 FLI1Q01543 452 aaPredicted RBP11.11□□□□□ -0.63
NCBP3-207ENST00000577169 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 EIF5AL1Q6IS14 154 aaKnown RBP11.11□□□□□ -0.63
NCBP3-207ENST00000577169 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 C11orf72Q8NBR9 251 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 ATG101Q9BSB4 218 aa11.11□□□□□ -0.63
NCBP3-207ENST00000577169 F6UZH7 168 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 PAGE4O60829 102 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 DAZ2Q13117 558 aaKnown RBP11.1□□□□□ -0.63
NCBP3-207ENST00000577169 ZFP69Q49AA0 526 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 CST9LP1Q5W188 147 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 C9orf62Q8N4C0 152 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 C8orf49Q96NF6 230 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 NDFIP1Q9BT67 221 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 KLF12Q9Y4X4 402 aa11.1□□□□□ -0.63
NCBP3-207ENST00000577169 GAGE12BA1L429 117 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 PEX7O00628 323 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 GAGE7O76087 117 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 LINC00612Q8N6U2 182 aa11.09□□□□□ -0.63
NCBP3-207ENST00000577169 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 FBLL1A6NHQ2 334 aaKnown RBP11.08□□□□□ -0.64
NCBP3-207ENST00000577169 ATP5G1P05496 136 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 ATP5G3P48201 142 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 SULT1A2P50226 295 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 RAB5CP51148 216 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 ZNF80P51504 273 aaPredicted RBP11.08□□□□□ -0.64
NCBP3-207ENST00000577169 TCL1AP56279 114 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
NCBP3-207ENST00000577169 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 FAM159AQ6UWV7 190 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 HIST1H2BAQ96A08 127 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 NDUFAF3Q9BU61 184 aa11.08□□□□□ -0.64
NCBP3-207ENST00000577169 F5H768 121 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 GNRH2O43555 120 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 PPT1P50897 306 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 CCL20P78556 96 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 Q6ZTI0 123 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 MDFICQ9P1T7 246 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 NAGKQ9UJ70 344 aa11.07□□□□□ -0.64
NCBP3-207ENST00000577169 GCGP01275 180 aa11.06□□□□□ -0.64
NCBP3-207ENST00000577169 TMEM183BQ1AE95 376 aa11.06□□□□□ -0.64
NCBP3-207ENST00000577169 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
NCBP3-207ENST00000577169 TMEM183AQ8IXX5 376 aa11.06□□□□□ -0.64
NCBP3-207ENST00000577169 ARL2-SNX15V9GYD0 113 aa11.06□□□□□ -0.64
NCBP3-207ENST00000577169 KMT2CQ8NEZ4 4911 aaKnown RBP11.06□□□□□ -0.64
NCBP3-207ENST00000577169 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 TRAV1-1A0A0B4J248 108 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 SPINK4O60575 86 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
NCBP3-207ENST00000577169 ZNF415Q09FC8 603 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 TDRG1Q3Y452 100 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 TMEM88Q6PEY1 159 aa11.05□□□□□ -0.64
NCBP3-207ENST00000577169 TRGV11A0A075B6L2 103 aa11.04□□□□□ -0.64
NCBP3-207ENST00000577169 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
NCBP3-207ENST00000577169 C11orf21Q9P2W6 132 aa11.04□□□□□ -0.64
NCBP3-207ENST00000577169 TRGV2A0A075B6R0 118 aa11.03□□□□□ -0.64
NCBP3-207ENST00000577169 PFN1P07737 140 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms