RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MED9Q9NWA0 146 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 X6R8D5 127 aa10.52□□□□□ -0.73
NPLOC4-209ENST00000572760 DNAH9Q9NYC9 4486 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 RBMY1A1P0DJD3 496 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 RBMY1CP0DJD4 496 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 RBMY1FQ15415 496 aaKnown RBP10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 SMUG1Q53HV7 270 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 Q86TA4 180 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 C8orf49Q96NF6 230 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 NEU1Q99519 415 aa10.51□□□□□ -0.73
NPLOC4-209ENST00000572760 TENM3Q9P273 2699 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 A0A0J9YWU9 116 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF705GA8MUZ8 300 aaPredicted RBP10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 RGS13O14921 159 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 DEFB4AO15263 64 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 TAS2R60P59551 318 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF506Q5JVG8 444 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 PRR9Q5T870 116 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 C2CD4CQ8TF44 421 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 KLF12Q9Y4X4 402 aa10.5□□□□□ -0.73
NPLOC4-209ENST00000572760 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
NPLOC4-209ENST00000572760 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
NPLOC4-209ENST00000572760 GCGP01275 180 aa10.49□□□□□ -0.73
NPLOC4-209ENST00000572760 EMP1P54849 157 aa10.49□□□□□ -0.73
NPLOC4-209ENST00000572760 FAM210AQ96ND0 272 aa10.49□□□□□ -0.73
NPLOC4-209ENST00000572760 TGP01266 2768 aa10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 CBY3A6NI87 242 aa10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 RPL35P42766 123 aaKnown RBP10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 BAGE2Q86Y30 109 aa10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 Q8NAQ8 132 aa10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
NPLOC4-209ENST00000572760 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 PRM2P04554 102 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 CEBPGP53567 150 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 IFITM2Q01629 132 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 MUC21Q5SSG8 566 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 Q6AWC8 147 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 EIF4E3Q8N5X7 224 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-209ENST00000572760 LTAP01374 205 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 PEA15Q15121 130 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF674Q2M3X9 581 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 Q6ZQT7 251 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 TMEM183AQ8IXX5 376 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 C16orf74Q96GX8 76 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 DERL1Q9BUN8 251 aa10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 C11orf68Q9H3H3 251 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-209ENST00000572760 HUWE1Q7Z6Z7 4374 aaKnown RBP10.46□□□□□ -0.74
NPLOC4-209ENST00000572760 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 RAB19A4D1S5 217 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 TMEM250H0YL14 139 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 PFN1P07737 140 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 AZU1P20160 251 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 GNG4P50150 75 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 ZNF80P51504 273 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 CENPWQ5EE01 88 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 CLLU1Q5K131 121 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 TMEM263Q8WUH6 116 aaKnown RBP10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 WWC2-AS2Q96NR7 200 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 EDA2RQ9HAV5 297 aa10.45□□□□□ -0.74
NPLOC4-209ENST00000572760 CXorf65A6NEN9 183 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 SNURFLB1AK76 121 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 FAM162BQ5T6X4 162 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 C11orf45Q8TAV5 145 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 ZC2HC1AQ96GY0 325 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 KCNS1Q96KK3 526 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 LINC00467Q9BRT7 94 aa10.44□□□□□ -0.74
NPLOC4-209ENST00000572760 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 NDUFS6O75380 124 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 MGST1P10620 155 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 PARLQ9H300 379 aa10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
NPLOC4-209ENST00000572760 SH2D1AO60880 128 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 ORM1P02763 201 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 SRP19P09132 144 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 ZNF415Q09FC8 603 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 FAM222AQ5U5X8 452 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 COX8CQ7Z4L0 72 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 RNASE8Q8TDE3 154 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 SMDT1Q9H4I9 107 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 TP53TG3Q9ULZ0 132 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 TIMM8BQ9Y5J9 83 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 STAB2Q8WWQ8 2551 aa10.42□□□□□ -0.74
NPLOC4-209ENST00000572760 TEX48A0A1B0GUV7 120 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms