RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 ZNF266Q14584 549 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 C1orf134Q5TEV5 83 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 SSX7Q7RTT5 188 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 C18orf15Q96N68 181 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 AQP10Q96PS8 301 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 ARPC5LQ9BPX5 153 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 OTORQ9NRC9 128 aa21.11■□□□□ 0.97
CTDNEP1-206ENST00000571409 HMGB3O15347 200 aaKnown RBP21.1■□□□□ 0.97
CTDNEP1-206ENST00000571409 FAM74A1Q5RGS3 127 aa21.1■□□□□ 0.97
CTDNEP1-206ENST00000571409 HSD17B11Q8NBQ5 300 aa21.1■□□□□ 0.97
CTDNEP1-206ENST00000571409 CMTM2Q8TAZ6 248 aa21.1■□□□□ 0.97
CTDNEP1-206ENST00000571409 RPH3ALQ9UNE2 315 aa21.1■□□□□ 0.97
CTDNEP1-206ENST00000571409 H3BNG1 76 aa21.09■□□□□ 0.97
CTDNEP1-206ENST00000571409 LENEPQ9Y5L5 61 aa21.09■□□□□ 0.97
CTDNEP1-206ENST00000571409 NBDYA0A0U1RRE5 68 aa21.08■□□□□ 0.97
CTDNEP1-206ENST00000571409 Q5BKY6 102 aa21.07■□□□□ 0.96
CTDNEP1-206ENST00000571409 MUC21Q5SSG8 566 aa21.07■□□□□ 0.96
CTDNEP1-206ENST00000571409 OR2G3Q8NGZ4 309 aa21.07■□□□□ 0.96
CTDNEP1-206ENST00000571409 MRPL16Q9NX20 251 aaKnown RBP21.07■□□□□ 0.96
CTDNEP1-206ENST00000571409 GIPP09681 153 aaPredicted RBP21.06■□□□□ 0.96
CTDNEP1-206ENST00000571409 CDC34P49427 236 aaPredicted RBP21.06■□□□□ 0.96
CTDNEP1-206ENST00000571409 ZNF415Q09FC8 603 aa21.06■□□□□ 0.96
CTDNEP1-206ENST00000571409 TMED6Q8WW62 240 aa21.06■□□□□ 0.96
CTDNEP1-206ENST00000571409 Q6AWC8 147 aa21.05■□□□□ 0.96
CTDNEP1-206ENST00000571409 GOLT1AQ6ZVE7 132 aa21.05■□□□□ 0.96
CTDNEP1-206ENST00000571409 PSMG3Q9BT73 122 aaPredicted RBP21.05■□□□□ 0.96
CTDNEP1-206ENST00000571409 ARL14EPLP0DKL9 152 aa21.04■□□□□ 0.96
CTDNEP1-206ENST00000571409 ATP6V0CP27449 155 aa21.04■□□□□ 0.96
CTDNEP1-206ENST00000571409 ASB13Q8WXK3 278 aa21.04■□□□□ 0.96
CTDNEP1-206ENST00000571409 VSIG2Q96IQ7 327 aa21.04■□□□□ 0.96
CTDNEP1-206ENST00000571409 ESRGQ1W209 222 aa21.03■□□□□ 0.96
CTDNEP1-206ENST00000571409 ARL6IP6Q8N6S5 226 aa21.03■□□□□ 0.96
CTDNEP1-206ENST00000571409 ST6GAL2Q96JF0 529 aa21.03■□□□□ 0.96
CTDNEP1-206ENST00000571409 STAG3L2P0CL84 134 aa21.02■□□□□ 0.96
CTDNEP1-206ENST00000571409 STAG3L3P0CL85 134 aa21.02■□□□□ 0.96
CTDNEP1-206ENST00000571409 Q9H8V8 135 aa21.02■□□□□ 0.96
CTDNEP1-206ENST00000571409 IGHV3-53P01767 116 aa21.01■□□□□ 0.95
CTDNEP1-206ENST00000571409 GNG5P63218 68 aa21.01■□□□□ 0.95
CTDNEP1-206ENST00000571409 FAM159AQ6UWV7 190 aa21.01■□□□□ 0.95
CTDNEP1-206ENST00000571409 RAB24Q969Q5 203 aa21.01■□□□□ 0.95
CTDNEP1-206ENST00000571409 MDFICQ9P1T7 246 aa21.01■□□□□ 0.95
CTDNEP1-206ENST00000571409 A0A096LPF7 62 aa21■□□□□ 0.95
CTDNEP1-206ENST00000571409 SERF2P84101 59 aa21■□□□□ 0.95
CTDNEP1-206ENST00000571409 C6orf223Q8N319 242 aa21■□□□□ 0.95
CTDNEP1-206ENST00000571409 INO80EQ8NBZ0 244 aaPredicted RBP21■□□□□ 0.95
CTDNEP1-206ENST00000571409 SH3BGRL3Q9H299 93 aa21■□□□□ 0.95
CTDNEP1-206ENST00000571409 TRAV8-1A0A0A6YYK1 113 aa20.99■□□□□ 0.95
CTDNEP1-206ENST00000571409 MBP02144 154 aa20.99■□□□□ 0.95
CTDNEP1-206ENST00000571409 TMEM183BQ1AE95 376 aa20.99■□□□□ 0.95
CTDNEP1-206ENST00000571409 TMEM183AQ8IXX5 376 aa20.99■□□□□ 0.95
CTDNEP1-206ENST00000571409 HERC2O95714 4834 aa20.99■□□□□ 0.95
CTDNEP1-206ENST00000571409 FXYD6-FXYD2A0A087WZ82 144 aa20.98■□□□□ 0.95
CTDNEP1-206ENST00000571409 UPK3BQ9BT76 320 aa20.98■□□□□ 0.95
CTDNEP1-206ENST00000571409 NAGKQ9UJ70 344 aa20.98■□□□□ 0.95
CTDNEP1-206ENST00000571409 MRPS16Q9Y3D3 137 aaKnown RBP20.98■□□□□ 0.95
CTDNEP1-206ENST00000571409 MUC4Q99102 2169 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 TRGV11A0A075B6L2 103 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 RNF222A6NCQ9 220 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 GCHFRP30047 84 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 TVP23CQ96ET8 276 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 PKD1P98161 4303 aa20.97■□□□□ 0.95
CTDNEP1-206ENST00000571409 F6UZH7 168 aa20.96■□□□□ 0.95
CTDNEP1-206ENST00000571409 PAX4O43316 350 aa20.96■□□□□ 0.95
CTDNEP1-206ENST00000571409 TREM1Q9NP99 234 aa20.96■□□□□ 0.95
CTDNEP1-206ENST00000571409 TNFSF18Q9UNG2 199 aa20.96■□□□□ 0.95
CTDNEP1-206ENST00000571409 RPL7L1Q6DKI1 246 aaKnown RBP20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 OR2T35Q8NGX2 323 aa20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 SUN5Q8TC36 379 aa20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 SGK494Q96LW2 274 aa20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 SPXQ9BT56 116 aa20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 PRO0255Q9UI72 69 aa20.95■□□□□ 0.94
CTDNEP1-206ENST00000571409 PKHD1P08F94 4074 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 TRAV21A0A0B4J279 112 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 RGS21Q2M5E4 152 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 TDRG1Q3Y452 100 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 C5orf17Q8NAS9 161 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 ACTR3CQ9C0K3 210 aaPredicted RBP20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 ICOSQ9Y6W8 199 aa20.94■□□□□ 0.94
CTDNEP1-206ENST00000571409 BORCS7-ASMTA0A0B4J1R7 106 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 SERTM2A0A1B0GWG4 89 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 CXorf1O96002 111 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 TNP2Q05952 138 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 SLAQ13239 276 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 FHL2Q14192 279 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 TTC32Q5I0X7 151 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 HHLA3Q9XRX5 114 aa20.93■□□□□ 0.94
CTDNEP1-206ENST00000571409 CRYBA4P53673 196 aa20.92■□□□□ 0.94
CTDNEP1-206ENST00000571409 C8orf49Q96NF6 230 aa20.92■□□□□ 0.94
CTDNEP1-206ENST00000571409 KRTAP1-5Q9BYS1 174 aa20.92■□□□□ 0.94
CTDNEP1-206ENST00000571409 TMEM167BQ9NRX6 74 aa20.92■□□□□ 0.94
CTDNEP1-206ENST00000571409 KIAA1109Q2LD37 5005 aa20.91■□□□□ 0.94
CTDNEP1-206ENST00000571409 GNRH2O43555 120 aa20.91■□□□□ 0.94
CTDNEP1-206ENST00000571409 TCRAP04437 139 aa20.91■□□□□ 0.94
CTDNEP1-206ENST00000571409 RASL10AQ92737 203 aa20.91■□□□□ 0.94
CTDNEP1-206ENST00000571409 NDFIP1Q9BT67 221 aa20.91■□□□□ 0.94
CTDNEP1-206ENST00000571409 SFTA3P0C7M3 94 aa20.9■□□□□ 0.94
CTDNEP1-206ENST00000571409 TRGV4A0A0C4DH28 118 aa20.89■□□□□ 0.93
CTDNEP1-206ENST00000571409 K7EQM0 130 aa20.89■□□□□ 0.93
CTDNEP1-206ENST00000571409 SUMO1P63165 101 aaKnown RBP20.89■□□□□ 0.93
CTDNEP1-206ENST00000571409 IQCF2Q8IXL9 164 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms