RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 C9JCJ5 164 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 F6UB75 175 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 F8W036 122 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 UBE2G1P62253 170 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 ZNF674Q2M3X9 581 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 Q8NAQ8 132 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 CSNK1G2-AS1Q8NCQ2 148 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 OR8A1Q8NGG7 326 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 IGF2BP2-AS1Q96M15 143 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 SMIM7Q9BQ49 75 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 PPP1R14DQ9NXH3 145 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 LYSTQ99698 3801 aa10.49□□□□□ -0.73
COMMD4-225ENST00000569245 AGRNO00468 2067 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 IGKV2-40A0A087WW87 121 aaPredicted RBP10.48□□□□□ -0.73
COMMD4-225ENST00000569245 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 IGKV2D-40P01614 121 aaPredicted RBP10.48□□□□□ -0.73
COMMD4-225ENST00000569245 FLI1Q01543 452 aaPredicted RBP10.48□□□□□ -0.73
COMMD4-225ENST00000569245 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 VGLL1Q99990 258 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 PSG8Q9UQ74 426 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 CARHSP1Q9Y2V2 147 aaKnown RBP10.48□□□□□ -0.73
COMMD4-225ENST00000569245 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 X6R8D5 127 aa10.48□□□□□ -0.73
COMMD4-225ENST00000569245 TRBV20OR9-2A0A075B6H5 130 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 TRAV8-1A0A0A6YYK1 113 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 A0A0J9YX75 114 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 ATP6V1G1O75348 118 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 LTAP01374 205 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 RBMY1A1P0DJD3 496 aaKnown RBP10.47□□□□□ -0.73
COMMD4-225ENST00000569245 RBMY1CP0DJD4 496 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 RBMY1FQ15415 496 aaKnown RBP10.47□□□□□ -0.73
COMMD4-225ENST00000569245 CENPWQ5EE01 88 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 Q86TA4 180 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 SMIM12Q96EX1 92 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 SGK494Q96LW2 274 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 LINC00477Q96M19 166 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 AGPAT4-IT1Q9H0P7 198 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 ZNF492Q9P255 531 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 NAT8Q9UHE5 227 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
COMMD4-225ENST00000569245 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.73
COMMD4-225ENST00000569245 PRB4P10163 310 aaPredicted RBP10.46□□□□□ -0.73
COMMD4-225ENST00000569245 GNG4P50150 75 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 HIST1H1AQ02539 215 aaPredicted RBP10.46□□□□□ -0.73
COMMD4-225ENST00000569245 ERCC8Q13216 396 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 TMEM241Q24JQ0 296 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 TMEM78Q5T7P6 136 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 BAGE2Q86Y30 109 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 CLUHP3Q96NS8 147 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 NIPSNAP3BQ9BS92 247 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
COMMD4-225ENST00000569245 PLECQ15149 4684 aaKnown RBP10.46□□□□□ -0.74
COMMD4-225ENST00000569245 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 A8MTW9 85 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 LY6G6CO95867 125 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 ZNF705DP0CH99 300 aaPredicted RBP10.45□□□□□ -0.74
COMMD4-225ENST00000569245 ZNF705BP0CI00 300 aaPredicted RBP10.45□□□□□ -0.74
COMMD4-225ENST00000569245 S100A1P23297 94 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 ZNF138P52744 262 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 PRNTQ86SH4 94 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 MLST8Q9BVC4 326 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 SDF2L1Q9HCN8 221 aa10.45□□□□□ -0.74
COMMD4-225ENST00000569245 IGLV2-8P01709 118 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 PNRC1Q12796 327 aaPredicted RBP10.44□□□□□ -0.74
COMMD4-225ENST00000569245 LINC01551Q86U37 167 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 TVP23CQ96ET8 276 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 FAM19A4Q96LR4 140 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 ODF3Q96PU9 254 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 GOLT1BQ9Y3E0 138 aa10.44□□□□□ -0.74
COMMD4-225ENST00000569245 DNAH1Q9P2D7 4330 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 EMP1P54849 157 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 RPL23P62829 140 aaKnown RBP10.43□□□□□ -0.74
COMMD4-225ENST00000569245 ZNF705AQ6ZN79 300 aaPredicted RBP10.43□□□□□ -0.74
COMMD4-225ENST00000569245 Q8TAT8 98 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 NDFIP1Q9BT67 221 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 TMEM208Q9BTX3 173 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 ALMS1Q8TCU4 4167 aa10.43□□□□□ -0.74
COMMD4-225ENST00000569245 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 GCGP01275 180 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 APOC3P02656 99 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 CRISP2P16562 243 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 LINC00476Q8WZB0 136 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 BIN3Q9NQY0 253 aa10.42□□□□□ -0.74
COMMD4-225ENST00000569245 K7EN84 100 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 SPINK13Q1W4C9 94 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 SVBPQ8N300 66 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 NHLRC2Q8NBF2 726 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 NEU1Q99519 415 aa10.41□□□□□ -0.74
COMMD4-225ENST00000569245 TMEM189A5PLL7 270 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms