RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 RNASE8Q8TDE3 154 aaKnown RBP8.8□□□□□ -1
RNF40-208ENST00000565995 RAB24Q969Q5 203 aa8.8□□□□□ -1
RNF40-208ENST00000565995 LINC01587Q99440 93 aa8.8□□□□□ -1
RNF40-208ENST00000565995 MRPS16Q9Y3D3 137 aaKnown RBP8.8□□□□□ -1
RNF40-208ENST00000565995 TRAV12-2A0A075B6T6 113 aa8.79□□□□□ -1
RNF40-208ENST00000565995 TEX46H3BTG2 121 aa8.79□□□□□ -1
RNF40-208ENST00000565995 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
RNF40-208ENST00000565995 FGF8P55075 233 aaPredicted RBP8.79□□□□□ -1
RNF40-208ENST00000565995 UBE2L3P68036 154 aaKnown RBP8.79□□□□□ -1
RNF40-208ENST00000565995 ZNF726P1Q15940 193 aa8.79□□□□□ -1
RNF40-208ENST00000565995 CDPF1Q6NVV7 123 aa8.79□□□□□ -1
RNF40-208ENST00000565995 OR10J6PQ8NGY7 276 aa8.79□□□□□ -1
RNF40-208ENST00000565995 LRRC20Q8TCA0 184 aa8.79□□□□□ -1
RNF40-208ENST00000565995 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
RNF40-208ENST00000565995 SFT2D1Q8WV19 159 aa8.79□□□□□ -1
RNF40-208ENST00000565995 PCNPQ8WW12 178 aaKnown RBP8.79□□□□□ -1
RNF40-208ENST00000565995 SLC25A2Q9BXI2 301 aa8.79□□□□□ -1
RNF40-208ENST00000565995 TRAV26-1A0A087WT03 109 aa8.78□□□□□ -1
RNF40-208ENST00000565995 CXorf1O96002 111 aa8.78□□□□□ -1
RNF40-208ENST00000565995 ARL14EPLP0DKL9 152 aa8.78□□□□□ -1
RNF40-208ENST00000565995 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
RNF40-208ENST00000565995 BLOC1S1P78537 153 aa8.78□□□□□ -1
RNF40-208ENST00000565995 IFITM2Q01629 132 aa8.78□□□□□ -1
RNF40-208ENST00000565995 Q5VSD8 79 aa8.78□□□□□ -1
RNF40-208ENST00000565995 IGFL4Q6B9Z1 124 aa8.78□□□□□ -1
RNF40-208ENST00000565995 BPIFA4PQ86YQ2 179 aa8.78□□□□□ -1
RNF40-208ENST00000565995 C20orf144Q9BQM9 153 aa8.78□□□□□ -1
RNF40-208ENST00000565995 PAXXQ9BUH6 204 aa8.78□□□□□ -1
RNF40-208ENST00000565995 OR10J4P0C629 311 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 STAG3L2P0CL84 134 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 STAG3L3P0CL85 134 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 PYYP10082 97 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 HOXA5P20719 270 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 PQLC2Q6ZP29 291 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 RNF182Q8N6D2 247 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 OR8A1Q8NGG7 326 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 OR51M1Q9H341 326 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 NOP10Q9NPE3 64 aaKnown RBP8.77□□□□□ -1.01
RNF40-208ENST00000565995 ZNF586Q9NXT0 402 aa8.77□□□□□ -1.01
RNF40-208ENST00000565995 H3BTX0 84 aa8.76□□□□□ -1.01
RNF40-208ENST00000565995 SNRPCP09234 159 aaKnown RBP8.76□□□□□ -1.01
RNF40-208ENST00000565995 LINC00315P59091 139 aa8.76□□□□□ -1.01
RNF40-208ENST00000565995 OR5I1Q13606 314 aa8.76□□□□□ -1.01
RNF40-208ENST00000565995 BLNKQ8WV28 456 aa8.76□□□□□ -1.01
RNF40-208ENST00000565995 SAT2Q96F10 170 aaPredicted RBP8.76□□□□□ -1.01
RNF40-208ENST00000565995 A0A087X0K7 114 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 H7BYZ3 331 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 GCHFRP30047 84 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 CDKN1BP46527 198 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 PSG3Q16557 428 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 FRZBQ92765 325 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 FAM167A-AS1Q96KT0 104 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 TMEM14CQ9P0S9 112 aa8.75□□□□□ -1.01
RNF40-208ENST00000565995 RGS13O14921 159 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 IFNA1P01562 189 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 NMBP08949 121 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 UBE2G2P60604 165 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 ZNF738Q8NE65 137 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 MBD3L1Q8WWY6 194 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 TMEM167BQ9NRX6 74 aa8.74□□□□□ -1.01
RNF40-208ENST00000565995 A0A096LPF7 62 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 A0A0J9YY99 117 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 EREGO14944 169 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
RNF40-208ENST00000565995 HTN1P15515 57 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
RNF40-208ENST00000565995 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 C18orf15Q96N68 181 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 GNG13Q9P2W3 67 aa8.73□□□□□ -1.01
RNF40-208ENST00000565995 TRAV1-1A0A0B4J248 108 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 H3BQ15 152 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 MRPS12O15235 138 aaKnown RBP8.72□□□□□ -1.01
RNF40-208ENST00000565995 SIVA1O15304 175 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 NBEAP1P0C6P0 100 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 PPT1P50897 306 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 KRTAP10-1P60331 282 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 ERVFC1-1P60608 527 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 GUK1Q16774 197 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 CLLU1Q5K131 121 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 AAMDCQ9H7C9 122 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 PPP1R14DQ9NXH3 145 aa8.72□□□□□ -1.01
RNF40-208ENST00000565995 TRBV19A0A075B6N1 114 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 SLC17A3O00476 420 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 GAGE7O76087 117 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
RNF40-208ENST00000565995 CCL20P78556 96 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.02
RNF40-208ENST00000565995 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 CCDC28AQ8IWP9 274 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 RPUSD4Q96CM3 377 aaKnown RBP8.71□□□□□ -1.02
RNF40-208ENST00000565995 SLC50A1Q9BRV3 221 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 MANBALQ9NQG1 85 aa8.71□□□□□ -1.02
RNF40-208ENST00000565995 PDE6HQ13956 83 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms