RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TRAV12-2A0A075B6T6 113 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 FAM74A7A6NL05 159 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 PDE6DO43924 150 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 CT45A10P0DMU9 189 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 CDKN1BP46527 198 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 PPP1R14DQ9NXH3 145 aa13.51□□□□□ -0.25
NME3-207ENST00000564628 RYR1P21817 5038 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 F6UZH7 168 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 MED14OSP0DP75 135 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 RANP62826 216 aaKnown RBP13.5□□□□□ -0.25
NME3-207ENST00000564628 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 CELA1Q9UNI1 258 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 DNAH2Q9P225 4427 aa13.5□□□□□ -0.25
NME3-207ENST00000564628 TMEM189A5PLL7 270 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 TSPOP30536 169 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 SUMO1P63165 101 aaKnown RBP13.49□□□□□ -0.25
NME3-207ENST00000564628 SRSF3P84103 164 aaKnown RBP13.49□□□□□ -0.25
NME3-207ENST00000564628 KIR3DS1Q14943 382 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 C9orf47Q6ZRZ4 202 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 FAM19A4Q96LR4 140 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 Q9H3A6 140 aa13.49□□□□□ -0.25
NME3-207ENST00000564628 YTHDF2Q9Y5A9 579 aaKnown RBP13.49□□□□□ -0.25
NME3-207ENST00000564628 PKHD1P08F94 4074 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 KRBOX1C9JBD0 128 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 TMEM250H0YL14 139 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 RRN3P1Q2M238 152 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 POM121L12Q8N7R1 296 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 C20orf144Q9BQM9 153 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 TMEM208Q9BTX3 173 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 AGPAT4-IT1Q9H0P7 198 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
NME3-207ENST00000564628 IGKV2-40A0A087WW87 121 aaPredicted RBP13.47□□□□□ -0.25
NME3-207ENST00000564628 TMEM218A2RU14 115 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 IGKV2D-40P01614 121 aaPredicted RBP13.47□□□□□ -0.25
NME3-207ENST00000564628 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
NME3-207ENST00000564628 P0DMU3 169 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 FAM231AP0DMU4 169 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 FAM231CP0DMU5 169 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 S100A1P23297 94 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 ERCC8Q13216 396 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 LINC00477Q96M19 166 aa13.47□□□□□ -0.25
NME3-207ENST00000564628 DNAH17Q9UFH2 4485 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 DEFB131BA0A096LNP1 70 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 PGPA6NDG6 321 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 LEPP41159 167 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 ATP5G3P48201 142 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 C12orf74Q32Q52 190 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 CCDC28AQ8IWP9 274 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 CMTM2Q8TAZ6 248 aa13.46□□□□□ -0.25
NME3-207ENST00000564628 PRSS29PA6NIE9 313 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 KLLNB2CW77 178 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 ATP6V1G1O75348 118 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 SFTA3P0C7M3 94 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 CRISP2P16562 243 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 SOHLH1Q5JUK2 328 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 VGLL1Q99990 258 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 DKK2Q9UBU2 259 aa13.45□□□□□ -0.26
NME3-207ENST00000564628 RBAKDNA6NC62 111 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 ZNF705GA8MUZ8 300 aaPredicted RBP13.44□□□□□ -0.26
NME3-207ENST00000564628 C9JQL5 133 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 H7BYZ3 331 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 PRM2P04554 102 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
NME3-207ENST00000564628 CSN1S1P47710 185 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 TAS2R60P59551 318 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 FAM74A3Q4VXF1 159 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 ARL6IP6Q8N6S5 226 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 C5orf17Q8NAS9 161 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 LINC01587Q99440 93 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
NME3-207ENST00000564628 TRBV7-9A0A0J9YWB2 115 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 TEX48A0A1B0GUV7 120 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 PLAC8L1A1L4L8 177 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 GGTLC3B5MD39 225 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 DIRC3C9JPN6 131 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 F8W036 122 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 RTL8CO15255 209 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 EMP1P54849 157 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 CYB561D1Q8N8Q1 229 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 ZNF492Q9P255 531 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
NME3-207ENST00000564628 AZU1P20160 251 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 CEBPGP53567 150 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 TMEM78Q5T7P6 136 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 ZFAND2AQ8N6M9 145 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 C11orf52Q96A22 123 aa13.42□□□□□ -0.26
NME3-207ENST00000564628 C7orf71A4D174 169 aa13.41□□□□□ -0.26
NME3-207ENST00000564628 K7EQM0 130 aa13.41□□□□□ -0.26
NME3-207ENST00000564628 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
NME3-207ENST00000564628 ZNF138P52744 262 aa13.41□□□□□ -0.26
NME3-207ENST00000564628 DNAH11Q96DT5 4516 aa13.41□□□□□ -0.26
NME3-207ENST00000564628 DYNC1H1Q14204 4646 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms