RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 H3BMM0 161 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 AKR1D1P51857 326 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
SMG1-208ENST00000563448 PRR9Q5T870 116 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 ZFAND2AQ8N6M9 145 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 NUDT10Q8NFP7 164 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 OR10G8Q8NGN5 311 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 ANAPC16Q96DE5 110 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 NUDT11Q96G61 164 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 OSTCQ9NRP0 149 aa7.52□□□□□ -1.21
SMG1-208ENST00000563448 TRBV7-9A0A0J9YWB2 115 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 MT-ND4LP03901 98 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 CRISP2P16562 243 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 KRTAP21-3Q3LHN1 58 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 PRR31Q5SQ13 230 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 AMTNQ6UX39 209 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 ODF3Q96PU9 254 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 WFDC10AQ9H1F0 79 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 NOTCH3Q9UM47 2321 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 RBMY1BA6NDE4 496 aaKnown RBP7.51□□□□□ -1.21
SMG1-208ENST00000563448 RBMY1EA6NEQ0 496 aaKnown RBP7.51□□□□□ -1.21
SMG1-208ENST00000563448 J3KRW8 73 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 RBMY1DP0C7P1 496 aaKnown RBP7.51□□□□□ -1.21
SMG1-208ENST00000563448 KIR3DS1Q14943 382 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 V9GYV3 84 aa7.51□□□□□ -1.21
SMG1-208ENST00000563448 PPP1R2P9O14990 202 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 SH2D1AO60880 128 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 OXLD1Q5BKU9 147 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 Q6ZQT7 251 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 CBLN2Q8IUK8 224 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 TMEM242Q9NWH2 141 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 ANK2Q01484 3957 aa7.5□□□□□ -1.21
SMG1-208ENST00000563448 KLLNB2CW77 178 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 H7BYZ3 331 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 GATCO43716 136 aaKnown RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 GPX1P07203 203 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 RAB5BP61020 215 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 FAM162BQ5T6X4 162 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 TMEM88Q6PEY1 159 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 TRPT1Q86TN4 253 aaKnown RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 C15orf54Q8N8G6 183 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 DAZAP1Q96EP5 407 aaKnown RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 FABP5P3A8MUU1 101 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 ZNF705GA8MUZ8 300 aaPredicted RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 M0R2Z0 102 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 P01737 135 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 PFN1P07737 140 aaKnown RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 RNASE4P34096 147 aaKnown RBP7.49□□□□□ -1.21
SMG1-208ENST00000563448 LEPP41159 167 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 FXYD7P58549 80 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 SPINK13Q1W4C9 94 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 STHQ8IWL8 128 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 CLUHP3Q96NS8 147 aa7.49□□□□□ -1.21
SMG1-208ENST00000563448 TRAV12-2A0A075B6T6 113 aa7.48□□□□□ -1.21
SMG1-208ENST00000563448 CA1P00915 261 aaPredicted RBP7.48□□□□□ -1.21
SMG1-208ENST00000563448 CDKN1BP46527 198 aa7.48□□□□□ -1.21
SMG1-208ENST00000563448 RPL19P84098 196 aaKnown RBP7.48□□□□□ -1.21
SMG1-208ENST00000563448 Q6AWC8 147 aa7.48□□□□□ -1.21
SMG1-208ENST00000563448 GTSCR1Q86UQ5 136 aa7.48□□□□□ -1.21
SMG1-208ENST00000563448 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
SMG1-208ENST00000563448 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
SMG1-208ENST00000563448 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
SMG1-208ENST00000563448 S100PP25815 95 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 Q8N1Y9 231 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 SMCO4Q9NRQ5 59 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 IL36BQ9NZH7 164 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 C11orf21Q9P2W6 132 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 C7orf71A4D174 169 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 CXorf65A6NEN9 183 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 S100A6P06703 90 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 TSPOP30536 169 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 GFI1BQ5VTD9 330 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 YPEL4Q96NS1 127 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 TUBA4BQ9H853 241 aa7.47□□□□□ -1.21
SMG1-208ENST00000563448 TRAV21A0A0B4J279 112 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 TMEM189A5PLL7 270 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 G3V4G9 280 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 FAM3BP58499 235 aaPredicted RBP7.46□□□□□ -1.22
SMG1-208ENST00000563448 EGFEM1PQ0D2K5 195 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 LINC01559Q495D7 138 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 CT83Q5H943 113 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 URGCP-MRPS24S4R325 110 aa7.46□□□□□ -1.22
SMG1-208ENST00000563448 TMSB15BA0A087X1C1 80 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 TRAV12-3A0A0B4J271 114 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 C1orf196B1AJZ1 125 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 ZNF324O75467 553 aaPredicted RBP7.45□□□□□ -1.22
SMG1-208ENST00000563448 ORM1P02763 201 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
SMG1-208ENST00000563448 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
SMG1-208ENST00000563448 GZMBP10144 247 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms