RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 JMJD8Q96S16 334 aa16.73■□□□□ 0.27
LINC00565-201ENST00000562710 HHLA3Q9XRX5 114 aa16.73■□□□□ 0.27
LINC00565-201ENST00000562710 SVEP1Q4LDE5 3571 aa16.73■□□□□ 0.27
LINC00565-201ENST00000562710 LINC01548A6NM66 108 aa16.73■□□□□ 0.27
LINC00565-201ENST00000562710 H3BUT2 72 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 PRSS1P07477 247 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 SAA4P35542 130 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 KLRB1Q12918 225 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 PSMG4Q5JS54 123 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 TMEM78Q5T7P6 136 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 GTF2H5Q6ZYL4 71 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 Q8N8P6 123 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 TMEM158Q8WZ71 300 aa16.72■□□□□ 0.27
LINC00565-201ENST00000562710 ASH1LQ9NR48 2969 aaKnown RBP16.72■□□□□ 0.27
LINC00565-201ENST00000562710 IGLV2-18A0A075B6J9 118 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 A0A1W2PPR1 153 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 TRGV3P03979 118 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 EEF1AKMT3Q96AZ1 226 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 IGHV3-49A0A0A0MS15 119 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 METTL26Q96S19 204 aa16.71■□□□□ 0.27
LINC00565-201ENST00000562710 IGKV2D-26A0A0A0MRZ7 120 aa16.7■□□□□ 0.26
LINC00565-201ENST00000562710 C8orf86Q6ZUL3 223 aa16.7■□□□□ 0.26
LINC00565-201ENST00000562710 OR2K2Q8NGT1 345 aa16.7■□□□□ 0.26
LINC00565-201ENST00000562710 MRPL53Q96EL3 112 aaKnown RBP16.7■□□□□ 0.26
LINC00565-201ENST00000562710 A0A0G2JLM5 398 aa16.7■□□□□ 0.26
LINC00565-201ENST00000562710 IGHV7-4-1A0A0J9YVY3 117 aa16.7■□□□□ 0.26
LINC00565-201ENST00000562710 ZNF207O43670 478 aaKnown RBP16.7■□□□□ 0.26
LINC00565-201ENST00000562710 TRBV7-1A0A0A6YYK4 115 aa16.69■□□□□ 0.26
LINC00565-201ENST00000562710 NAA38Q9BRA0 125 aaKnown RBP16.69■□□□□ 0.26
LINC00565-201ENST00000562710 IGKCP01834 107 aa16.69■□□□□ 0.26
LINC00565-201ENST00000562710 FOXC2Q99958 501 aa16.69■□□□□ 0.26
LINC00565-201ENST00000562710 VPS25Q9BRG1 176 aa16.69■□□□□ 0.26
LINC00565-201ENST00000562710 HIF1ANQ9NWT6 349 aa16.69■□□□□ 0.26
LINC00565-201ENST00000562710 CENPVL3A0A0U1RRI6 287 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 C9orf47Q6ZRZ4 202 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 SMIM15Q7Z3B0 74 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 RAB37Q96AX2 223 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 ATP5LO75964 103 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 SMPXQ9UHP9 88 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 U3KQE9 123 aa16.68■□□□□ 0.26
LINC00565-201ENST00000562710 K7EP34 96 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 K7ERU9 68 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 SMIM17P0DL12 118 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 NRACQ8N912 160 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 HIGD1BQ9P298 99 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 ATRXP46100 2492 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 SPTBN1Q01082 2364 aaKnown RBP16.67■□□□□ 0.26
LINC00565-201ENST00000562710 PRSS47A8MTI9 375 aa16.67■□□□□ 0.26
LINC00565-201ENST00000562710 DPM2O94777 84 aa16.66■□□□□ 0.26
LINC00565-201ENST00000562710 Q6ZQT7 251 aa16.66■□□□□ 0.26
LINC00565-201ENST00000562710 TTTY13Q9BZ97 58 aa16.66■□□□□ 0.26
LINC00565-201ENST00000562710 UFC1Q9Y3C8 167 aa16.66■□□□□ 0.26
LINC00565-201ENST00000562710 TRAV26-2A0A0B4J265 109 aa16.65■□□□□ 0.26
LINC00565-201ENST00000562710 TM4SF20Q53R12 229 aa16.65■□□□□ 0.26
LINC00565-201ENST00000562710 C5orf56Q8N8D9 126 aa16.65■□□□□ 0.26
LINC00565-201ENST00000562710 IGF2RP11717 2491 aa16.65■□□□□ 0.26
LINC00565-201ENST00000562710 IGHV4-4A0A075B6R2 117 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 TMEM8BA6NDV4 472 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 LAGE3Q14657 143 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 ZC2HC1BQ5TFG8 222 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 A0A1W2PPM0 123 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 ATP5G2Q06055 141 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 SPANXN1Q5VSR9 72 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 GTSCR1Q86UQ5 136 aa16.64■□□□□ 0.25
LINC00565-201ENST00000562710 NPFFO15130 113 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 LMO4P61968 165 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 RAXQ9Y2V3 346 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 SELENOKQ9Y6D0 94 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 GCSHP23434 173 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 EFNA4P52798 201 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 UCNP55089 124 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 MYOZ3Q8TDC0 251 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 C16orf92Q96LL3 132 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 CHAC1Q9BUX1 264 aa16.63■□□□□ 0.25
LINC00565-201ENST00000562710 UBTD1Q9HAC8 227 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 COL6A6A6NMZ7 2263 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 SMIM13P0DJ93 91 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 FXYD2P54710 66 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 BPESC1Q9GZL8 116 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 TMEM160Q9NX00 188 aa16.62■□□□□ 0.25
LINC00565-201ENST00000562710 TRBV25-1A0A075B6N4 114 aa16.61■□□□□ 0.25
LINC00565-201ENST00000562710 TRAV40A0A0B4J280 105 aa16.61■□□□□ 0.25
LINC00565-201ENST00000562710 MRPL35Q9NZE8 188 aaKnown RBP16.61■□□□□ 0.25
LINC00565-201ENST00000562710 PRR9Q5T870 116 aa16.61■□□□□ 0.25
LINC00565-201ENST00000562710 SPCS1Q9Y6A9 102 aa16.61■□□□□ 0.25
LINC00565-201ENST00000562710 H3BVH4 76 aa16.6■□□□□ 0.25
LINC00565-201ENST00000562710 SAP30O75446 220 aa16.6■□□□□ 0.25
LINC00565-201ENST00000562710 TMEM219Q86XT9 240 aa16.6■□□□□ 0.25
LINC00565-201ENST00000562710 GLMPQ8WWB7 406 aa16.6■□□□□ 0.25
LINC00565-201ENST00000562710 HLA-DRB4P13762 266 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 SRSF1Q07955 248 aaKnown RBP eCLIP16.59■□□□□ 0.25
LINC00565-201ENST00000562710 C9orf139Q6ZV77 190 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 ATP6V0BQ99437 205 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 HLA-DRB4X5D2U9 266 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 TRAV41A0A0B4J266 112 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 OR5A1Q8NGJ0 315 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 ITLN2Q8WWU7 325 aaPredicted RBP16.59■□□□□ 0.25
LINC00565-201ENST00000562710 C20orf173Q96LM9 149 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 LENEPQ9Y5L5 61 aa16.59■□□□□ 0.25
LINC00565-201ENST00000562710 COTL1Q14019 142 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms