RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 ATG5Q9H1Y0 275 aa2.17□□□□□ -2.06
HERC1-211ENST00000560983 RRP15Q9Y3B9 282 aaKnown RBP2.17□□□□□ -2.06
HERC1-211ENST00000560983 V9GY05 133 aa2.17□□□□□ -2.06
HERC1-211ENST00000560983 IGLV1-50A0A075B6I6 118 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 A0A087X0K7 114 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 A0A0G2JRQ6 117 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 LOC100130705A0A1B0GUX0 176 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 C7orf71A4D174 169 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 METTL21EPA6NDL7 271 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 EFCAB10A6NFE3 127 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 ZFP92A6NM28 416 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 GPR31O00270 319 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 MRPS12O15235 138 aaKnown RBP2.16□□□□□ -2.06
HERC1-211ENST00000560983 MPDU1O75352 247 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 TCRBP04435 133 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 HSMCR30P0CW71 290 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 RNASE4P34096 147 aaKnown RBP2.16□□□□□ -2.06
HERC1-211ENST00000560983 LEPP41159 167 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 CBX5P45973 191 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 SPCS3P61009 180 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 COX6A2Q02221 97 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 BTN1A1Q13410 526 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 MAJINQ3KP22 176 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 PHLDA2Q53GA4 152 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 OR4C5Q8NGB2 326 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 OR5H2Q8NGV7 314 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 BORCS5Q969J3 196 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 SOSTQ9BQB4 213 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 ENY2Q9NPA8 101 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 ZNF331Q9NQX6 463 aaPredicted RBP2.16□□□□□ -2.06
HERC1-211ENST00000560983 Q9UF83 564 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 POMPQ9Y244 141 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 URGCP-MRPS24S4R325 110 aa2.16□□□□□ -2.06
HERC1-211ENST00000560983 TRBV6-4A0A1B0GX49 114 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 FABP12A6NFH5 140 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 IFITM5A6NNB3 132 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 SNRPCP09234 159 aaKnown RBP2.15□□□□□ -2.07
HERC1-211ENST00000560983 OR10J4P0C629 311 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 LINC00694P0DN24 101 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 ORM2P19652 201 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 GPX4P36969 197 aaPredicted RBP2.15□□□□□ -2.07
HERC1-211ENST00000560983 GNG2P59768 71 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 HERV-K104P61576 105 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 TSPAN5P62079 268 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 Q0VG73 95 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 OPCMLQ14982 345 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 TMEM183BQ1AE95 376 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 NMSQ5H8A3 153 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 PRR9Q5T870 116 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 FAM219AQ8IW50 185 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 TMEM183AQ8IXX5 376 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 DHRSXQ8N5I4 330 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 OR10G9Q8NGN4 311 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 SLC25A38Q96DW6 304 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 LINC00477Q96M19 166 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 TRGV9Q99603 122 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 ZNF2Q9BSG1 426 aaPredicted RBP2.15□□□□□ -2.07
HERC1-211ENST00000560983 SHANK2-AS3Q9BTD1 123 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 FXYD6Q9H0Q3 95 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 AP4S1Q9Y587 144 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 KMT2DO14686 5537 aa2.15□□□□□ -2.07
HERC1-211ENST00000560983 IGKV2-24A0A0C4DH68 120 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 CRYM-AS1A6NIL9 109 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 H3BRN7 92 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 ZNF253O75346 499 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 NDUFS6O75380 124 aaKnown RBP2.14□□□□□ -2.07
HERC1-211ENST00000560983 CFDP00746 253 aaPredicted RBP2.14□□□□□ -2.07
HERC1-211ENST00000560983 IFNA7P01567 189 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 HLA-DQA1P01909 254 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 SEC11BP0C7V7 166 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 CRISP2P16562 243 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 RPL7P18124 248 aaKnown RBP2.14□□□□□ -2.07
HERC1-211ENST00000560983 RANBP1P43487 201 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 POLR2GP62487 172 aaKnown RBP eCLIP2.14□□□□□ -2.07
HERC1-211ENST00000560983 ERCC8Q13216 396 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 FAM162BQ5T6X4 162 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 LAIR2Q6ISS4 152 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 ZFAND2AQ8N6M9 145 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 BPIFCQ8NFQ6 507 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 OR4D10Q8NGI6 311 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 LRRC20Q8TCA0 184 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 MARCH1Q8TCQ1 289 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 SAT2Q96F10 170 aaPredicted RBP2.14□□□□□ -2.07
HERC1-211ENST00000560983 RETNLBQ9BQ08 111 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 PRADC1Q9BSG0 188 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 PDCD10Q9BUL8 212 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 AGPAT4-IT1Q9H0P7 198 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 OR51M1Q9H341 326 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 DIABLOQ9NR28 239 aa2.14□□□□□ -2.07
HERC1-211ENST00000560983 A0A087WWC5 75 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 TRAV1-1A0A0B4J248 108 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 ANKRD65E5RJM6 399 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 H3BTX0 84 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 SLC17A3O00476 420 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 CASQ2O14958 399 aaPredicted RBP2.13□□□□□ -2.07
HERC1-211ENST00000560983 ARL6IP5O75915 188 aa2.13□□□□□ -2.07
HERC1-211ENST00000560983 PMP2P02689 132 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms