RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 APRG1Q8IVJ8 170 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 Q8TAT8 98 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 C8orf49Q96NF6 230 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 GPR61Q9BZJ8 451 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 IL36BQ9NZH7 164 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 V9GYV3 84 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 HLA-DRB4X5D2U9 266 aa6.41□□□□□ -1.38
TRAF3-209ENST00000560463 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 ANK2Q01484 3957 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 A8MWL6 223 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 GPX1P07203 203 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF705DP0CH99 300 aaPredicted RBP6.4□□□□□ -1.38
TRAF3-209ENST00000560463 ZNF705BP0CI00 300 aaPredicted RBP6.4□□□□□ -1.38
TRAF3-209ENST00000560463 TSPOP30536 169 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 CRIP1P50238 77 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 RPL19P84098 196 aaKnown RBP6.4□□□□□ -1.38
TRAF3-209ENST00000560463 ODF3L2Q3SX64 289 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 GDF5OSQ5U4N7 250 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 LINC00322Q6ZN03 302 aaPredicted RBP6.4□□□□□ -1.38
TRAF3-209ENST00000560463 CBLN2Q8IUK8 224 aa6.4□□□□□ -1.38
TRAF3-209ENST00000560463 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.38
TRAF3-209ENST00000560463 XKRY2A2RUG3 117 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 H3BMM0 161 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
TRAF3-209ENST00000560463 PRB4P10163 310 aaPredicted RBP6.39□□□□□ -1.39
TRAF3-209ENST00000560463 DEFB1P60022 68 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 RPS20P60866 119 aaKnown RBP6.39□□□□□ -1.39
TRAF3-209ENST00000560463 ELOBQ15370 118 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 Q6AWC8 147 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 TSKUQ8WUA8 353 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 GFRA4Q9GZZ7 299 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 MUC4Q99102 2169 aa6.39□□□□□ -1.39
TRAF3-209ENST00000560463 TRBV24-1A0A075B6N3 115 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 TRAV21A0A0B4J279 112 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 SMIM27A0A1W2PRY6 76 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 TMEM189A5PLL7 270 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 KLLNB2CW77 178 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 SH2D1AO60880 128 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 CDKN1BP46527 198 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 ZNF80P51504 273 aaPredicted RBP6.38□□□□□ -1.39
TRAF3-209ENST00000560463 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 ACTL10Q5JWF8 245 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 STHQ8IWL8 128 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 ZFAND2AQ8N6M9 145 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 OR2D3Q8NGH3 330 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 YPEL4Q96NS1 127 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 PYGO2Q9BRQ0 406 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 ZMAT5Q9UDW3 170 aaKnown RBP6.38□□□□□ -1.39
TRAF3-209ENST00000560463 NAT8BQ9UHF3 227 aa6.38□□□□□ -1.39
TRAF3-209ENST00000560463 COLCA2A8K830 154 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 AMBPP02760 352 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 CXCL1P09341 107 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 FOXA3P55318 350 aaPredicted RBP6.37□□□□□ -1.39
TRAF3-209ENST00000560463 NUTF2P61970 127 aaKnown RBP6.37□□□□□ -1.39
TRAF3-209ENST00000560463 PRR31Q5SQ13 230 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 GTSCR1Q86UQ5 136 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 C20orf144Q9BQM9 153 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 URGCP-MRPS24S4R325 110 aa6.37□□□□□ -1.39
TRAF3-209ENST00000560463 A0A1W2PPQ1 181 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 C7orf71A4D174 169 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 KNCNA6PVL3 124 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 ORM1P02763 201 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 CD7P09564 240 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 IGLL1P15814 213 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 RNASE4P34096 147 aaKnown RBP6.36□□□□□ -1.39
TRAF3-209ENST00000560463 FAM3BP58499 235 aaPredicted RBP6.36□□□□□ -1.39
TRAF3-209ENST00000560463 ZNF124Q15973 351 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 COX19Q49B96 90 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 PRR9Q5T870 116 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 TRPT1Q86TN4 253 aaKnown RBP6.36□□□□□ -1.39
TRAF3-209ENST00000560463 KCNS1Q96KK3 526 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 C19orf73Q9NVV2 129 aa6.36□□□□□ -1.39
TRAF3-209ENST00000560463 NACAE9PAV3 2078 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 ZNF324O75467 553 aaPredicted RBP6.35□□□□□ -1.39
TRAF3-209ENST00000560463 CA1P00915 261 aaPredicted RBP6.35□□□□□ -1.39
TRAF3-209ENST00000560463 IGKV3-20P01619 116 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 TYMSP04818 313 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 SPINK13Q1W4C9 94 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 DNLZQ5SXM8 178 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 GFI1BQ5VTD9 330 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 RASL11AQ6T310 242 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 FAM159AQ6UWV7 190 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 ATP5L2Q7Z4Y8 100 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 SPATA3Q8NHX4 192 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 FAM210BQ96KR6 192 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 NEU1Q99519 415 aa6.35□□□□□ -1.39
TRAF3-209ENST00000560463 TGIF2-C20orf24A0A0A6YYL0 155 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 TRAV12-3A0A0B4J271 114 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 IGKV3D-20A0A0C4DH25 116 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 A0A1B0GW15 77 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 F2Z2F3 143 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 J3KRW8 73 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 M0R2Z0 102 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 RAB5AP20339 215 aa6.34□□□□□ -1.39
TRAF3-209ENST00000560463 TCL1AP56279 114 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms