RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ERCC8Q13216 396 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 MRPL51Q4U2R6 128 aaKnown RBP6.19□□□□□ -1.42
SMAD3-212ENST00000559937 SAMD13Q5VXD3 122 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 IGFL4Q6B9Z1 124 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 IL17RELQ6ZVW7 336 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 LINC01356Q8N9X3 169 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 C16orf92Q96LL3 132 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 TPPP3Q9BW30 176 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 AGPAT4-IT1Q9H0P7 198 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 MS4A6AQ9H2W1 248 aa6.19□□□□□ -1.42
SMAD3-212ENST00000559937 MRPS16Q9Y3D3 137 aaKnown RBP6.19□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV4-4A0A075B6R2 117 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 A0A096LNT2 108 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 LINC01546A6NGU7 62 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 D6R8Y8 96 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 K7EMT4 169 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 M0QZ24 198 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 SNAI2O43623 268 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 RPLP1P05386 114 aaKnown RBP6.18□□□□□ -1.42
SMAD3-212ENST00000559937 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
SMAD3-212ENST00000559937 CACNG7P62955 275 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 LY6EQ16553 131 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 LINC01545Q5VT33 79 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 ZNF575Q86XF7 245 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 AMN1Q8IY45 258 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 RNF182Q8N6D2 247 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 SIGLEC8Q9NYZ4 499 aa6.18□□□□□ -1.42
SMAD3-212ENST00000559937 CSMD1Q96PZ7 3565 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3-66A0A0C4DH42 116 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV7-4-1A0A0J9YVY3 117 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 SOCS3O14543 225 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 ZNF207O43670 478 aaKnown RBP6.17□□□□□ -1.42
SMAD3-212ENST00000559937 CSN3P07498 182 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 MED14OSP0DP75 135 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 PF4V1P10720 104 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 COX6B1P14854 86 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 IGLL1P15814 213 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 CKS2P33552 79 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 LOXL1Q08397 574 aaPredicted RBP6.17□□□□□ -1.42
SMAD3-212ENST00000559937 TWIST1Q15672 202 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 Q6ZN92 141 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 APRG1Q8IVJ8 170 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 OR4X2Q8NGF9 303 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 DPF1Q92782 380 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 LINC00527Q9UJ94 153 aa6.17□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3OR16-13A0A075B7E8 117 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3-49A0A0A0MS15 119 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 IGHV3-74A0A0B4J1X5 117 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 IGKV3D-20A0A0C4DH25 116 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 PRSS47A8MTI9 375 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 TCF21O43680 179 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 FSHBP01225 129 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 HBDP02042 147 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 TSPOP30536 169 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 IFI27P40305 119 aaPredicted RBP6.16□□□□□ -1.42
SMAD3-212ENST00000559937 FOXE3Q13461 319 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 LGALS9BQ3B8N2 356 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 COL5A1-AS1Q5SY13 56 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 LGALS9CQ6DKI2 356 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 UNQ9165/PRO28630Q6UXU0 137 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 LINC00173Q6ZV60 143 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 SMIM15Q7Z3B0 74 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 DEFB125Q8N687 156 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 ZNF738Q8NE65 137 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 RNF185Q96GF1 192 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 NXT2Q9NPJ8 142 aaKnown RBP6.16□□□□□ -1.42
SMAD3-212ENST00000559937 FBN2P35556 2912 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 CR1P17927 2039 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 F8P00451 2351 aa6.16□□□□□ -1.42
SMAD3-212ENST00000559937 OTOGQ6ZRI0 2925 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 A0A096LNJ9 63 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 TRAV21A0A0B4J279 112 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 SMAD7O15105 426 aaKnown RBP6.15□□□□□ -1.42
SMAD3-212ENST00000559937 TCAPO15273 167 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 AVPP01185 164 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 NPYP01303 97 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 TRBV12-3P01733 135 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 PRB4P10163 310 aaPredicted RBP6.15□□□□□ -1.42
SMAD3-212ENST00000559937 BLCAPP62952 87 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 FAM106AQ4KMX7 169 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 PSMG4Q5JS54 123 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 LRRC75A-AS1Q8N1F1 130 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 FAM19A4Q96LR4 140 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 PMCHL2Q9BQD1 86 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 DAZ1Q9NQZ3 744 aaKnown RBP6.15□□□□□ -1.42
SMAD3-212ENST00000559937 BEX4Q9NWD9 120 aaPredicted RBP6.15□□□□□ -1.42
SMAD3-212ENST00000559937 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 PEF1Q9UBV8 284 aaKnown RBP6.15□□□□□ -1.42
SMAD3-212ENST00000559937 SMPXQ9UHP9 88 aa6.15□□□□□ -1.42
SMAD3-212ENST00000559937 MAP1AP78559 2803 aaPredicted RBP6.15□□□□□ -1.43
SMAD3-212ENST00000559937 ANKRD17O75179 2603 aaKnown RBP6.14□□□□□ -1.43
SMAD3-212ENST00000559937 PRRC2AP48634 2157 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms