RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ARL14EPLP0DKL9 152 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 CCL18P55774 89 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 DAZ2Q13117 558 aaKnown RBP8.71□□□□□ -1.02
SMAD3-208ENST00000558827 ANXA2RQ3ZCQ2 193 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 ZNF680Q8NEM1 530 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 ZNRF2Q8NHG8 242 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 CMTM2Q8TAZ6 248 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 OTORQ9NRC9 128 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 MDFICQ9P1T7 246 aa8.71□□□□□ -1.02
SMAD3-208ENST00000558827 F6UZH7 168 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 CDC34P49427 236 aaPredicted RBP8.7□□□□□ -1.02
SMAD3-208ENST00000558827 TCL1AP56279 114 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 TMEM183BQ1AE95 376 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 ESRGQ1W209 222 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 C1orf134Q5TEV5 83 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 RPL7L1Q6DKI1 246 aaKnown RBP8.7□□□□□ -1.02
SMAD3-208ENST00000558827 IQCF2Q8IXL9 164 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 TMEM183AQ8IXX5 376 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 LYPD1Q8N2G4 141 aa8.7□□□□□ -1.02
SMAD3-208ENST00000558827 DYNC1H1Q14204 4646 aaKnown RBP8.7□□□□□ -1.02
SMAD3-208ENST00000558827 PKD1P98161 4303 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 A0A096LPF7 62 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 A0A1B0GVY2 172 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 SMLR1H3BR10 107 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 GNRH2O43555 120 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 SPINK4O60575 86 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 GIPP09681 153 aaPredicted RBP8.69□□□□□ -1.02
SMAD3-208ENST00000558827 ZNF266Q14584 549 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 RAB24Q969Q5 203 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 TVP23CQ96ET8 276 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 VSIG2Q96IQ7 327 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 AQP10Q96PS8 301 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 LINC00467Q9BRT7 94 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 HERC2O95714 4834 aa8.69□□□□□ -1.02
SMAD3-208ENST00000558827 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 RBAKDNA6NC62 111 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 NMBP08949 121 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 SFTA3P0C7M3 94 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 GCHFRP30047 84 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 INO80EQ8NBZ0 244 aaPredicted RBP8.68□□□□□ -1.02
SMAD3-208ENST00000558827 OR2T35Q8NGX2 323 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 C8orf49Q96NF6 230 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
SMAD3-208ENST00000558827 RNF222A6NCQ9 220 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 STAG3L2P0CL84 134 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 STAG3L3P0CL85 134 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 ZNF415Q09FC8 603 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 KIAA1109Q2LD37 5005 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 FAM74A1Q5RGS3 127 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 OR2G3Q8NGZ4 309 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 Q9H8V8 135 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 TREM1Q9NP99 234 aa8.67□□□□□ -1.02
SMAD3-208ENST00000558827 PKHD1P08F94 4074 aa8.66□□□□□ -1.02
SMAD3-208ENST00000558827 PAX4O43316 350 aa8.66□□□□□ -1.02
SMAD3-208ENST00000558827 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-208ENST00000558827 SUMO1P63165 101 aaKnown RBP8.66□□□□□ -1.02
SMAD3-208ENST00000558827 TNP2Q05952 138 aa8.66□□□□□ -1.02
SMAD3-208ENST00000558827 SOHLH1Q5JUK2 328 aa8.66□□□□□ -1.02
SMAD3-208ENST00000558827 IBA57Q5T440 356 aaKnown RBP8.66□□□□□ -1.02
SMAD3-208ENST00000558827 PSMG3Q9BT73 122 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-208ENST00000558827 ACTR3CQ9C0K3 210 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-208ENST00000558827 TNFSF18Q9UNG2 199 aa8.66□□□□□ -1.02
SMAD3-208ENST00000558827 G3V3Q6 166 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 FAM3BP58499 235 aaPredicted RBP8.65□□□□□ -1.02
SMAD3-208ENST00000558827 UBE2G2P60604 165 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 Q6AWC8 147 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 ZNF575Q86XF7 245 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 ZNF479Q96JC4 524 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 ST6GAL2Q96JF0 529 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
SMAD3-208ENST00000558827 BORCS7-ASMTA0A0B4J1R7 106 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 TRAV34A0A0B4J273 112 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 TRGV4A0A0C4DH28 118 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 ARPC5O15511 151 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
SMAD3-208ENST00000558827 FHL2Q14192 279 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 ZNF726P1Q15940 193 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 LINC00479Q96M42 142 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
SMAD3-208ENST00000558827 TRGV11A0A075B6L2 103 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 CXorf1O96002 111 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 MBP02144 154 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 TCRAP04437 139 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 TYMSP04818 313 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 CRYBA4P53673 196 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 SERF2P84101 59 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
SMAD3-208ENST00000558827 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms