RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 PRAF2O60831 178 aa13.54□□□□□ -0.24
PRKCH-219ENST00000555906 KRTAP10-2P60368 255 aa13.54□□□□□ -0.24
PRKCH-219ENST00000555906 PRO0255Q9UI72 69 aa13.54□□□□□ -0.24
PRKCH-219ENST00000555906 OR7C2O60412 319 aa13.53□□□□□ -0.24
PRKCH-219ENST00000555906 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
PRKCH-219ENST00000555906 SLAQ13239 276 aa13.53□□□□□ -0.24
PRKCH-219ENST00000555906 Q6ZQT7 251 aa13.53□□□□□ -0.24
PRKCH-219ENST00000555906 Q6ZRN7 208 aaPredicted RBP13.53□□□□□ -0.24
PRKCH-219ENST00000555906 LYPD1Q8N2G4 141 aa13.53□□□□□ -0.24
PRKCH-219ENST00000555906 ATP5SQ99766 215 aa13.53□□□□□ -0.24
PRKCH-219ENST00000555906 UPK1BO75841 260 aa13.52□□□□□ -0.25
PRKCH-219ENST00000555906 NXPH4O95158 308 aa13.52□□□□□ -0.25
PRKCH-219ENST00000555906 IGHV3-53P01767 116 aa13.52□□□□□ -0.25
PRKCH-219ENST00000555906 CSN1S1P47710 185 aa13.52□□□□□ -0.25
PRKCH-219ENST00000555906 UBE2L3P68036 154 aaKnown RBP13.52□□□□□ -0.25
PRKCH-219ENST00000555906 ZNF266Q14584 549 aa13.52□□□□□ -0.25
PRKCH-219ENST00000555906 CRYBA4P53673 196 aa13.51□□□□□ -0.25
PRKCH-219ENST00000555906 Q8N1X5 172 aa13.51□□□□□ -0.25
PRKCH-219ENST00000555906 LENEPQ9Y5L5 61 aa13.51□□□□□ -0.25
PRKCH-219ENST00000555906 KHDC3LQ587J8 217 aa13.5□□□□□ -0.25
PRKCH-219ENST00000555906 Q6AWC8 147 aa13.5□□□□□ -0.25
PRKCH-219ENST00000555906 PPP1R1CQ8WVI7 109 aa13.5□□□□□ -0.25
PRKCH-219ENST00000555906 HHLA3Q9XRX5 114 aa13.5□□□□□ -0.25
PRKCH-219ENST00000555906 PET100P0DJ07 73 aa13.49□□□□□ -0.25
PRKCH-219ENST00000555906 H2BFSP57053 126 aa13.49□□□□□ -0.25
PRKCH-219ENST00000555906 RANP62826 216 aaKnown RBP13.49□□□□□ -0.25
PRKCH-219ENST00000555906 FHL2Q14192 279 aa13.49□□□□□ -0.25
PRKCH-219ENST00000555906 MRPL23Q16540 153 aaKnown RBP13.49□□□□□ -0.25
PRKCH-219ENST00000555906 C8orf49Q96NF6 230 aa13.49□□□□□ -0.25
PRKCH-219ENST00000555906 HSPB11Q9Y547 144 aa13.49□□□□□ -0.25
PRKCH-219ENST00000555906 INMT-MINDY4F8WBC2 141 aa13.48□□□□□ -0.25
PRKCH-219ENST00000555906 TAS2R45P59539 299 aa13.48□□□□□ -0.25
PRKCH-219ENST00000555906 FFAR4Q5NUL3 377 aa13.48□□□□□ -0.25
PRKCH-219ENST00000555906 MUC21Q5SSG8 566 aa13.48□□□□□ -0.25
PRKCH-219ENST00000555906 TMED6Q8WW62 240 aa13.48□□□□□ -0.25
PRKCH-219ENST00000555906 TRGV11A0A075B6L2 103 aa13.47□□□□□ -0.25
PRKCH-219ENST00000555906 DIRC3C9JPN6 131 aa13.47□□□□□ -0.25
PRKCH-219ENST00000555906 NEGR1Q7Z3B1 354 aa13.47□□□□□ -0.25
PRKCH-219ENST00000555906 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
PRKCH-219ENST00000555906 TRGV4A0A0C4DH28 118 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 ERVFC1-1P60608 527 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 IFITM3Q01628 133 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 LYPD5Q6UWN5 251 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 IQCF2Q8IXL9 164 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 RASL10AQ92737 203 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 MARVELD1Q9BSK0 173 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 SPXQ9BT56 116 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 MDFICQ9P1T7 246 aa13.46□□□□□ -0.25
PRKCH-219ENST00000555906 MPC2O95563 127 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 IFNA5P01569 189 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 TMEM183BQ1AE95 376 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 FAM159AQ6UWV7 190 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 TMEM183AQ8IXX5 376 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 SCRT2Q9NQ03 307 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 OTORQ9NRC9 128 aa13.45□□□□□ -0.26
PRKCH-219ENST00000555906 K7EQD1 137 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 SRIP30626 198 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 CDPF1Q6NVV7 123 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 NFE4Q86UQ8 179 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 SCGB1C1Q8TD33 95 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 PCNPQ8WW12 178 aaKnown RBP13.44□□□□□ -0.26
PRKCH-219ENST00000555906 ZNF479Q96JC4 524 aa13.44□□□□□ -0.26
PRKCH-219ENST00000555906 K7EP13 123 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 EREGO14944 169 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 SSNA1O43805 119 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 ORM1P02763 201 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 SFTA3P0C7M3 94 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 RPL12P30050 165 aaKnown RBP13.43□□□□□ -0.26
PRKCH-219ENST00000555906 SMIM3Q9BZL3 60 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 LY96Q9Y6Y9 160 aa13.43□□□□□ -0.26
PRKCH-219ENST00000555906 TRAV4A0A0B4J268 109 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 ARL6IP6Q8N6S5 226 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 CMTM2Q8TAZ6 248 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 HYLS1Q96M11 299 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 PGPEP1Q9NXJ5 209 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 MBD2Q9UBB5 411 aa13.42□□□□□ -0.26
PRKCH-219ENST00000555906 TRAV9-2A0A087WT02 112 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 GYPEP15421 78 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 PTTG2Q9NZH5 202 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 NAGKQ9UJ70 344 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 RPH3ALQ9UNE2 315 aa13.41□□□□□ -0.26
PRKCH-219ENST00000555906 C9JCJ5 164 aa13.4□□□□□ -0.26
PRKCH-219ENST00000555906 ACOT6Q3I5F7 207 aaPredicted RBP13.4□□□□□ -0.26
PRKCH-219ENST00000555906 WFDC10BQ8IUB3 73 aa13.4□□□□□ -0.26
PRKCH-219ENST00000555906 TXNDC17Q9BRA2 123 aa13.4□□□□□ -0.26
PRKCH-219ENST00000555906 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 PGPA6NDG6 321 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 M0R2P5 195 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRKCH-219ENST00000555906 DNAH10OSP0CZ25 163 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 DEFA1P59665 94 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 DEFA3P59666 94 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 GOLT1AQ6ZVE7 132 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 TNFRSF18Q9Y5U5 241 aa13.39□□□□□ -0.27
PRKCH-219ENST00000555906 IGHV3-16A0A0C4DH30 117 aa13.38□□□□□ -0.27
PRKCH-219ENST00000555906 WFDC1Q9HC57 220 aa13.38□□□□□ -0.27
PRKCH-219ENST00000555906 MSRB1Q9NZV6 116 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms