RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RARRES2Q99969 163 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 MANBALQ9NQG1 85 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 OTORQ9NRC9 128 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 PRELID1Q9Y255 219 aa4.64□□□□□ -1.67
SCFD1-212ENST00000554486 LINC00862A6NCI5 91 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 RBFOX3A6NFN3 312 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 PRAC2D3DTV9 90 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 ID1P41134 155 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 DEFB131AP59861 70 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 CD81P60033 236 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 SNRPD3P62318 126 aaKnown RBP4.63□□□□□ -1.67
SCFD1-212ENST00000554486 GNG5P63218 68 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 PSMG4Q5JS54 123 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF506Q5JVG8 444 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 CST9LP1Q5W188 147 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF738Q8NE65 137 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 MRPL53Q96EL3 112 aaKnown RBP4.63□□□□□ -1.67
SCFD1-212ENST00000554486 FAM210AQ96ND0 272 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 CSTL1Q9H114 145 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 WFDC10AQ9H1F0 79 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 CLEC5AQ9NY25 188 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 VAX2Q9UIW0 290 aa4.63□□□□□ -1.67
SCFD1-212ENST00000554486 IGKV2-40A0A087WW87 121 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 KNCNA6PVL3 124 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 C9JQL5 133 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 C11orf94C9JXX5 98 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 F6UB75 175 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 IFNA1P01562 189 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 IGKV2D-40P01614 121 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 SLC25A5P05141 298 aaKnown RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF705DP0CH99 300 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 ZNF705BP0CI00 300 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 TAGLN2P37802 199 aaKnown RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 MEF2BQ02080 365 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 ERCC8Q13216 396 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 KPRPQ5T749 579 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 APRG1Q8IVJ8 170 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 ARL6IP6Q8N6S5 226 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 C5orf17Q8NAS9 161 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 OR8A1Q8NGG7 326 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 RXFP4Q8TDU9 374 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 RPUSD4Q96CM3 377 aaKnown RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 NKX6-2Q9C056 277 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-212ENST00000554486 MED9Q9NWA0 146 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 EPDR1Q9UM22 224 aa4.62□□□□□ -1.67
SCFD1-212ENST00000554486 A0A0J9YX75 114 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 RAB19A4D1S5 217 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 A8MTW9 85 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 OR11H12B2RN74 326 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 H3BMM0 161 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 PEX7O00628 323 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 TCRAP04437 139 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 SRP19P09132 144 aaKnown RBP4.61□□□□□ -1.67
SCFD1-212ENST00000554486 CSN1S1P47710 185 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 CMC4P56277 68 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-212ENST00000554486 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 GOLT1AQ6ZVE7 132 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 DEFB125Q8N687 156 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 CMTM2Q8TAZ6 248 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 C11orf52Q96A22 123 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 LINC00479Q96M42 142 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 VGLL1Q99990 258 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 TXNDC17Q9BRA2 123 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 ATG101Q9BSB4 218 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 EIF5A2Q9GZV4 153 aaKnown RBP4.61□□□□□ -1.67
SCFD1-212ENST00000554486 SAV1Q9H4B6 383 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-212ENST00000554486 RPH3ALQ9UNE2 315 aa4.61□□□□□ -1.67
SCFD1-212ENST00000554486 NBEAL2Q6ZNJ1 2754 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 TRAV8-1A0A0A6YYK1 113 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 TRAV34A0A0B4J273 112 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 RBAKDNA6NC62 111 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 RBMY1BA6NDE4 496 aaKnown RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 RBMY1EA6NEQ0 496 aaKnown RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 F6UZH7 168 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 PDE6DO43924 150 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 NDUFS6O75380 124 aaKnown RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 IGLV2-11P01706 119 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 RBMY1DP0C7P1 496 aaKnown RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 HLA-DRB4P13762 266 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 HIST1H1AQ02539 215 aaPredicted RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 PEA15Q15121 130 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 ACTL10Q5JWF8 245 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 EBLN2Q6P2I7 272 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 AMTNQ6UX39 209 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 GTSCR1Q86UQ5 136 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 COMMD7Q86VX2 200 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 CYB561D1Q8N8Q1 229 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 OR10J6PQ8NGY7 276 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 TCEAL7Q9BRU2 100 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 DERL1Q9BUN8 251 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 C1QTNF4Q9BXJ3 329 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 AGPAT4-IT1Q9H0P7 198 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 ZMAT5Q9UDW3 170 aaKnown RBP4.6□□□□□ -1.67
SCFD1-212ENST00000554486 KLF12Q9Y4X4 402 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 HLA-DRB4X5D2U9 266 aa4.6□□□□□ -1.67
SCFD1-212ENST00000554486 TRBV6-1A0A0K0K1D8 114 aa4.59□□□□□ -1.67
SCFD1-212ENST00000554486 A0A1B0GUV1 79 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms