RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 GFI1BQ5VTD9 330 aa4.91□□□□□ -1.62
LINC00517-202ENST00000554257 FAM231DQ6ZW35 169 aa4.91□□□□□ -1.62
LINC00517-202ENST00000554257 ZFP30Q9Y2G7 519 aa4.91□□□□□ -1.62
LINC00517-202ENST00000554257 FRAS1Q86XX4 4008 aa4.9□□□□□ -1.62
LINC00517-202ENST00000554257 GUCA2BQ16661 112 aa4.9□□□□□ -1.62
LINC00517-202ENST00000554257 ACTL10Q5JWF8 245 aa4.9□□□□□ -1.62
LINC00517-202ENST00000554257 IQCF2Q8IXL9 164 aa4.9□□□□□ -1.62
LINC00517-202ENST00000554257 SRD5A3Q9H8P0 318 aa4.9□□□□□ -1.62
LINC00517-202ENST00000554257 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 AKR1C3P42330 323 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 HIST1H1AQ02539 215 aaPredicted RBP4.89□□□□□ -1.63
LINC00517-202ENST00000554257 BTN1A1Q13410 526 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 TDRG1Q3Y452 100 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 C11orf72Q8NBR9 251 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 V9GYV3 84 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 KRBOX1C9JBD0 128 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 M0R2Z0 102 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 DUSP14O95147 198 aaKnown RBP4.89□□□□□ -1.63
LINC00517-202ENST00000554257 LINC01559Q495D7 138 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 ATRAIDQ6UW56 229 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 PRNTQ86SH4 94 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 NHLRC2Q8NBF2 726 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 X6R8D5 127 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 KIR2DL5BA0A0G2JN68 375 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 KIR2DL5BA0A0G2JPC4 375 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 OR5I1Q13606 314 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 KIR2DL5AQ8N109 375 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 KIR2DL5BQ8NHK3 375 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 NAT8Q9UHE5 227 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
LINC00517-202ENST00000554257 CDKN1BP46527 198 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 OR10J6PQ8NGY7 276 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SCRT2Q9NQ03 307 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SH2D1AO60880 128 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 PFN1P07737 140 aaKnown RBP4.88□□□□□ -1.63
LINC00517-202ENST00000554257 CSN1S1P47710 185 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SPINK13Q1W4C9 94 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
LINC00517-202ENST00000554257 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 CMTM2Q8TAZ6 248 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 C20orf144Q9BQM9 153 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 TM2D3Q9BRN9 247 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 TREM1Q9NP99 234 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 RPH3ALQ9UNE2 315 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 TRAV12-2A0A075B6T6 113 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 C7orf71A4D174 169 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 LEPP41159 167 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SAPCD1Q5SSQ6 148 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SMIM7Q9BQ49 75 aa4.88□□□□□ -1.63
LINC00517-202ENST00000554257 SPRY2O43597 315 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 NXPH4O95158 308 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 CXCL1P09341 107 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 FRMD6-AS1P0C7T7 363 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 IGLC6P0CF74 106 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 GNG4P50150 75 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 TMEM78Q5T7P6 136 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 GTSF1Q8WW33 167 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 NEU1Q99519 415 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 SSBP4Q9BWG4 385 aaPredicted RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 ALMS1Q8TCU4 4167 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 ZNF727A8MUV8 499 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 PRM2P04554 102 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 RNASE3P12724 160 aaKnown RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 FXYD7P58549 80 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 SOHLH1Q5JUK2 328 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 EBLN2Q6P2I7 272 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 BAGE2Q86Y30 109 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 NUDT10Q8NFP7 164 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 NUDT11Q96G61 164 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 C9orf85Q96MD7 179 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 RNASE7Q9H1E1 156 aaKnown RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 SNAI2O43623 268 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 PRB2P02812 416 aaPredicted RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 LINC00612Q8N6U2 182 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 RNASE8Q8TDE3 154 aaKnown RBP4.87□□□□□ -1.63
LINC00517-202ENST00000554257 NIPSNAP3BQ9BS92 247 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 CNFNQ9BYD5 112 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 OSTCQ9NRP0 149 aa4.87□□□□□ -1.63
LINC00517-202ENST00000554257 A0A087WWC5 75 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 LOC102724200A0A096LPH7 203 aaPredicted RBP4.86□□□□□ -1.63
LINC00517-202ENST00000554257 SMIM27A0A1W2PRY6 76 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 ANXA2RQ3ZCQ2 193 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 CT83Q5H943 113 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 STHQ8IWL8 128 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 Q8NAQ8 132 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 CLRN3Q8NCR9 226 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 RNF183Q96D59 192 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 SFRP2Q96HF1 295 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 OVOL2Q9BRP0 275 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 TYMSP04818 313 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 AZU1P20160 251 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 PNRC1Q12796 327 aaPredicted RBP4.86□□□□□ -1.63
LINC00517-202ENST00000554257 FAM162BQ5T6X4 162 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 SBSPONQ8IVN8 264 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 OR10G8Q8NGN5 311 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 PTH2Q96A98 100 aa4.86□□□□□ -1.63
LINC00517-202ENST00000554257 TMEM242Q9NWH2 141 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms