RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 TAAR5O14804 337 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 RGS13O14921 159 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 Q6ZTI0 123 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 ARL6IP6Q8N6S5 226 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 POM121L12Q8N7R1 296 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 ZNF680Q8NEM1 530 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 TMED6Q8WW62 240 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 LENEPQ9Y5L5 61 aa13.19□□□□□ -0.3
HDAC4-217ENST00000553145 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
HDAC4-217ENST00000553145 CXorf1O96002 111 aa13.18□□□□□ -0.3
HDAC4-217ENST00000553145 TVP23CQ96ET8 276 aa13.18□□□□□ -0.3
HDAC4-217ENST00000553145 ST6GAL2Q96JF0 529 aa13.18□□□□□ -0.3
HDAC4-217ENST00000553145 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
HDAC4-217ENST00000553145 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 GGTLC3B5MD39 225 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 MUC21Q5SSG8 566 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 Q6AWC8 147 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 KCNRGQ8N5I3 272 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 C15orf53Q8NAA6 179 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 TMEM167BQ9NRX6 74 aa13.17□□□□□ -0.3
HDAC4-217ENST00000553145 CTXND1A0A1B0GTU2 59 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 HOXA5P20719 270 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 TCL1AP56279 114 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 ZNF345Q14585 488 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
HDAC4-217ENST00000553145 C5orf17Q8NAS9 161 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 SGK494Q96LW2 274 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 ARPC5LQ9BPX5 153 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 BIRC6Q9NR09 4857 aa13.16□□□□□ -0.3
HDAC4-217ENST00000553145 F6UZH7 168 aa13.15□□□□□ -0.3
HDAC4-217ENST00000553145 TCRAP04437 139 aa13.15□□□□□ -0.3
HDAC4-217ENST00000553145 AKR1C8PQ5T2L2 129 aa13.15□□□□□ -0.3
HDAC4-217ENST00000553145 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
HDAC4-217ENST00000553145 TMPRSS5Q9H3S3 457 aa13.15□□□□□ -0.3
HDAC4-217ENST00000553145 TRGV1A0A0A0MS02 117 aa13.14□□□□□ -0.31
HDAC4-217ENST00000553145 HMSDA8MTL9 139 aa13.14□□□□□ -0.31
HDAC4-217ENST00000553145 SPINK4O60575 86 aa13.14□□□□□ -0.31
HDAC4-217ENST00000553145 FGF8P55075 233 aaPredicted RBP13.14□□□□□ -0.31
HDAC4-217ENST00000553145 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
HDAC4-217ENST00000553145 UBE2DNLQ8IWF7 75 aa13.14□□□□□ -0.31
HDAC4-217ENST00000553145 NUDT3O95989 172 aa13.13□□□□□ -0.31
HDAC4-217ENST00000553145 OR5I1Q13606 314 aa13.13□□□□□ -0.31
HDAC4-217ENST00000553145 TREM1Q9NP99 234 aa13.13□□□□□ -0.31
HDAC4-217ENST00000553145 MRPL16Q9NX20 251 aaKnown RBP13.13□□□□□ -0.31
HDAC4-217ENST00000553145 EPDR1Q9UM22 224 aa13.13□□□□□ -0.31
HDAC4-217ENST00000553145 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 IGLV2-11P01706 119 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 RNF212Q495C1 297 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
HDAC4-217ENST00000553145 TRGV2A0A075B6R0 118 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 TRAV26-1A0A087WT03 109 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 A0A0J9YY99 117 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 UBE2G2P60604 165 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 TMEM183BQ1AE95 376 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 TMEM183AQ8IXX5 376 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 C8orf49Q96NF6 230 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 NAGKQ9UJ70 344 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 NACAE9PAV3 2078 aa13.11□□□□□ -0.31
HDAC4-217ENST00000553145 IGLV2-18A0A075B6J9 118 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 A0A0D9SG52 128 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 M0R2N4 97 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 BCL2L11O43521 198 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 FHITP49789 147 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 FAM159AQ6UWV7 190 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 CYB561D1Q8N8Q1 229 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 PSG8Q9UQ74 426 aa13.1□□□□□ -0.31
HDAC4-217ENST00000553145 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
HDAC4-217ENST00000553145 ZNF80P51504 273 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-217ENST00000553145 TDRG1Q3Y452 100 aa13.09□□□□□ -0.31
HDAC4-217ENST00000553145 ATG101Q9BSB4 218 aa13.09□□□□□ -0.31
HDAC4-217ENST00000553145 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-217ENST00000553145 FRAS1Q86XX4 4008 aa13.09□□□□□ -0.31
HDAC4-217ENST00000553145 KANTRA0A1W2PQU2 76 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 FAM74A7A6NL05 159 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 K7EQM0 130 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 GNRH2O43555 120 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 FLI1Q01543 452 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-217ENST00000553145 LGALS9BQ3B8N2 356 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 TMEM75Q8N9X5 138 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 NDFIP1Q9BT67 221 aa13.08□□□□□ -0.32
HDAC4-217ENST00000553145 TRGV11A0A075B6L2 103 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 IGHV3-53P01767 116 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 PRNTQ86SH4 94 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
HDAC4-217ENST00000553145 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
HDAC4-217ENST00000553145 IFNA7P01567 189 aa13.06□□□□□ -0.32
HDAC4-217ENST00000553145 TYMSP04818 313 aa13.06□□□□□ -0.32
HDAC4-217ENST00000553145 Q6ZNX1 250 aa13.06□□□□□ -0.32
HDAC4-217ENST00000553145 TMUB2Q71RG4 321 aa13.06□□□□□ -0.32
HDAC4-217ENST00000553145 LINC00588Q9Y4M8 146 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms