RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
ITGA5-213ENST00000553071 GFI1BQ5VTD9 330 aa12.52□□□□□ -0.41
ITGA5-213ENST00000553071 LINC00479Q96M42 142 aa12.52□□□□□ -0.41
ITGA5-213ENST00000553071 TRAV34A0A0B4J273 112 aa12.51□□□□□ -0.41
ITGA5-213ENST00000553071 TOR2AQ5JU69 321 aa12.51□□□□□ -0.41
ITGA5-213ENST00000553071 SGK494Q96LW2 274 aa12.51□□□□□ -0.41
ITGA5-213ENST00000553071 LINC01587Q99440 93 aa12.51□□□□□ -0.41
ITGA5-213ENST00000553071 PYGO2Q9BRQ0 406 aa12.51□□□□□ -0.41
ITGA5-213ENST00000553071 TRAV21A0A0B4J279 112 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 J3KRW8 73 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 LTAP01374 205 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 Q86TA4 180 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 BAGE2Q86Y30 109 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 C1orf158Q8N1D5 194 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 SMIM12Q96EX1 92 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 U3KQK5 164 aa12.5□□□□□ -0.41
ITGA5-213ENST00000553071 IGHV3OR16-12A0A075B7B8 117 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 TRAV12-3A0A0B4J271 114 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 TMEM189A5PLL7 270 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
ITGA5-213ENST00000553071 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 Q6AWC8 147 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 TMEM183AQ8IXX5 376 aa12.49□□□□□ -0.41
ITGA5-213ENST00000553071 PCNPQ8WW12 178 aaKnown RBP12.49□□□□□ -0.41
ITGA5-213ENST00000553071 RGS13O14921 159 aa12.48□□□□□ -0.41
ITGA5-213ENST00000553071 ZNF324O75467 553 aaPredicted RBP12.48□□□□□ -0.41
ITGA5-213ENST00000553071 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
ITGA5-213ENST00000553071 LINC00467Q9BRT7 94 aa12.48□□□□□ -0.41
ITGA5-213ENST00000553071 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
ITGA5-213ENST00000553071 RAB19A4D1S5 217 aa12.47□□□□□ -0.41
ITGA5-213ENST00000553071 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
ITGA5-213ENST00000553071 BTN1A1Q13410 526 aa12.47□□□□□ -0.41
ITGA5-213ENST00000553071 ZNF493Q6ZR52 646 aa12.47□□□□□ -0.41
ITGA5-213ENST00000553071 RETNQ9HD89 108 aa12.47□□□□□ -0.41
ITGA5-213ENST00000553071 GCGP01275 180 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.41
ITGA5-213ENST00000553071 GNG4P50150 75 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 KIR3DS1Q14943 382 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 FAM159AQ6UWV7 190 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 KCNS1Q96KK3 526 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 X6R8D5 127 aa12.46□□□□□ -0.41
ITGA5-213ENST00000553071 NBEAL2Q6ZNJ1 2754 aa12.45□□□□□ -0.42
ITGA5-213ENST00000553071 FAM74A3Q4VXF1 159 aa12.45□□□□□ -0.42
ITGA5-213ENST00000553071 EIF4E3Q8N5X7 224 aaKnown RBP12.45□□□□□ -0.42
ITGA5-213ENST00000553071 C11orf68Q9H3H3 251 aaKnown RBP12.45□□□□□ -0.42
ITGA5-213ENST00000553071 IGHV1OR15-1A0A075B7D0 117 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 C9JCJ5 164 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
ITGA5-213ENST00000553071 HTN1P15515 57 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 PRR9Q5T870 116 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 C16orf74Q96GX8 76 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 C8orf49Q96NF6 230 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
ITGA5-213ENST00000553071 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 CBY3A6NI87 242 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 RBMY1A1P0DJD3 496 aaKnown RBP12.43□□□□□ -0.42
ITGA5-213ENST00000553071 RBMY1CP0DJD4 496 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 RBMY1FQ15415 496 aaKnown RBP12.43□□□□□ -0.42
ITGA5-213ENST00000553071 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 TMEM263Q8WUH6 116 aaKnown RBP12.43□□□□□ -0.42
ITGA5-213ENST00000553071 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 PARLQ9H300 379 aa12.43□□□□□ -0.42
ITGA5-213ENST00000553071 IGHV4-28A0A0C4DH34 117 aa12.42□□□□□ -0.42
ITGA5-213ENST00000553071 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
ITGA5-213ENST00000553071 CEBPGP53567 150 aa12.42□□□□□ -0.42
ITGA5-213ENST00000553071 ZNF674Q2M3X9 581 aa12.42□□□□□ -0.42
ITGA5-213ENST00000553071 Q8NAQ8 132 aa12.42□□□□□ -0.42
ITGA5-213ENST00000553071 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
ITGA5-213ENST00000553071 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 UQCC3Q6UW78 93 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 IL17DQ8TAD2 202 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
ITGA5-213ENST00000553071 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 SDF2L1Q9HCN8 221 aa12.41□□□□□ -0.42
ITGA5-213ENST00000553071 ZNF80P51504 273 aaPredicted RBP12.4□□□□□ -0.42
ITGA5-213ENST00000553071 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
ITGA5-213ENST00000553071 IBA57Q5T440 356 aaKnown RBP12.4□□□□□ -0.42
ITGA5-213ENST00000553071 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
ITGA5-213ENST00000553071 TIMM8BQ9Y5J9 83 aaPredicted RBP12.4□□□□□ -0.42
ITGA5-213ENST00000553071 A0A0J9YWU9 116 aa12.39□□□□□ -0.43
ITGA5-213ENST00000553071 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
ITGA5-213ENST00000553071 ORM1P02763 201 aa12.39□□□□□ -0.43
ITGA5-213ENST00000553071 SPART-AS1P0CW21 52 aa12.39□□□□□ -0.43
ITGA5-213ENST00000553071 MGST1P10620 155 aaKnown RBP12.39□□□□□ -0.43
ITGA5-213ENST00000553071 MUC21Q5SSG8 566 aa12.39□□□□□ -0.43
ITGA5-213ENST00000553071 RNASE8Q8TDE3 154 aaKnown RBP12.39□□□□□ -0.43
ITGA5-213ENST00000553071 PRKDCP78527 4128 aaKnown RBP12.38□□□□□ -0.43
ITGA5-213ENST00000553071 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
ITGA5-213ENST00000553071 SH2D1AO60880 128 aa12.38□□□□□ -0.43
ITGA5-213ENST00000553071 AZU1P20160 251 aa12.38□□□□□ -0.43
ITGA5-213ENST00000553071 NHLRC2Q8NBF2 726 aa12.38□□□□□ -0.43
ITGA5-213ENST00000553071 TP53TG3Q9ULZ0 132 aa12.38□□□□□ -0.43
ITGA5-213ENST00000553071 TRBV20OR9-2A0A075B6H5 130 aa12.37□□□□□ -0.43
ITGA5-213ENST00000553071 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms