RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 RAB14P61106 215 aa15.52■□□□□ 0.08
NEK3-202ENST00000550841 TMEM183BQ1AE95 376 aa15.52■□□□□ 0.08
NEK3-202ENST00000550841 RRN3P1Q2M238 152 aa15.52■□□□□ 0.08
NEK3-202ENST00000550841 NBEAL2Q6ZNJ1 2754 aa15.52■□□□□ 0.07
NEK3-202ENST00000550841 LOC102723971A0A1B0GUV8 181 aa15.51■□□□□ 0.07
NEK3-202ENST00000550841 SCO2A0A1W2PP80 73 aa15.51■□□□□ 0.07
NEK3-202ENST00000550841 ZNF324O75467 553 aaPredicted RBP15.51■□□□□ 0.07
NEK3-202ENST00000550841 BTN1A1Q13410 526 aa15.51■□□□□ 0.07
NEK3-202ENST00000550841 PYGO2Q9BRQ0 406 aa15.51■□□□□ 0.07
NEK3-202ENST00000550841 TMEM189A5PLL7 270 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 SMUG1Q53HV7 270 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 ZNF767PQ75MW2 155 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 C2CD4CQ8TF44 421 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 C11orf52Q96A22 123 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 TVP23CQ96ET8 276 aa15.5■□□□□ 0.07
NEK3-202ENST00000550841 C11orf68Q9H3H3 251 aaKnown RBP15.5■□□□□ 0.07
NEK3-202ENST00000550841 IGHV4-28A0A0C4DH34 117 aa15.49■□□□□ 0.07
NEK3-202ENST00000550841 RBMY1A1P0DJD3 496 aaKnown RBP15.49■□□□□ 0.07
NEK3-202ENST00000550841 RBMY1CP0DJD4 496 aa15.49■□□□□ 0.07
NEK3-202ENST00000550841 RBMY1FQ15415 496 aaKnown RBP15.49■□□□□ 0.07
NEK3-202ENST00000550841 Q6AWC8 147 aa15.49■□□□□ 0.07
NEK3-202ENST00000550841 Q8NAQ8 132 aa15.49■□□□□ 0.07
NEK3-202ENST00000550841 HUWE1Q7Z6Z7 4374 aaKnown RBP15.49■□□□□ 0.07
NEK3-202ENST00000550841 TRAV21A0A0B4J279 112 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 A0A0J9YWU9 116 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 ZNF705GA8MUZ8 300 aaPredicted RBP15.48■□□□□ 0.07
NEK3-202ENST00000550841 ZNF506Q5JVG8 444 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 PRR9Q5T870 116 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 Q86TA4 180 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 LINC00467Q9BRT7 94 aa15.48■□□□□ 0.07
NEK3-202ENST00000550841 EIF5A2Q9GZV4 153 aaKnown RBP15.48■□□□□ 0.07
NEK3-202ENST00000550841 RGS13O14921 159 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 NDUFS6O75380 124 aaKnown RBP15.47■□□□□ 0.07
NEK3-202ENST00000550841 HTN1P15515 57 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 ZNF493Q6ZR52 646 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 FAM210AQ96ND0 272 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 EDA2RQ9HAV5 297 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 MED9Q9NWA0 146 aa15.47■□□□□ 0.07
NEK3-202ENST00000550841 LTAP01374 205 aa15.46■□□□□ 0.07
NEK3-202ENST00000550841 C8orf49Q96NF6 230 aa15.46■□□□□ 0.07
NEK3-202ENST00000550841 COX8CQ7Z4L0 72 aa15.45■□□□□ 0.06
NEK3-202ENST00000550841 BAGE2Q86Y30 109 aa15.45■□□□□ 0.06
NEK3-202ENST00000550841 EIF4E3Q8N5X7 224 aaKnown RBP15.45■□□□□ 0.06
NEK3-202ENST00000550841 IL17DQ8TAD2 202 aa15.45■□□□□ 0.06
NEK3-202ENST00000550841 PCNPQ8WW12 178 aaKnown RBP15.45■□□□□ 0.06
NEK3-202ENST00000550841 C16orf74Q96GX8 76 aa15.45■□□□□ 0.06
NEK3-202ENST00000550841 IGHV1OR15-1A0A075B7D0 117 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 TMEM250H0YL14 139 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 DEFB4AO15263 64 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 GCGP01275 180 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 RPL35P42766 123 aaKnown RBP15.44■□□□□ 0.06
NEK3-202ENST00000550841 ANXA2RQ3ZCQ2 193 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 TOR2AQ5JU69 321 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 FAM159AQ6UWV7 190 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 TMEM183AQ8IXX5 376 aa15.44■□□□□ 0.06
NEK3-202ENST00000550841 CBY3A6NI87 242 aa15.43■□□□□ 0.06
NEK3-202ENST00000550841 FABP5P3A8MUU1 101 aa15.43■□□□□ 0.06
NEK3-202ENST00000550841 PFN1P07737 140 aaKnown RBP15.43■□□□□ 0.06
NEK3-202ENST00000550841 TMEM263Q8WUH6 116 aaKnown RBP15.43■□□□□ 0.06
NEK3-202ENST00000550841 COL7A1Q02388 2944 aa15.42■□□□□ 0.06
NEK3-202ENST00000550841 TEX48A0A1B0GUV7 120 aa15.42■□□□□ 0.06
NEK3-202ENST00000550841 AZU1P20160 251 aa15.42■□□□□ 0.06
NEK3-202ENST00000550841 IFITM2Q01629 132 aa15.42■□□□□ 0.06
NEK3-202ENST00000550841 KCNS1Q96KK3 526 aa15.42■□□□□ 0.06
NEK3-202ENST00000550841 KMT2CQ8NEZ4 4911 aaKnown RBP15.42■□□□□ 0.06
NEK3-202ENST00000550841 PRM2P04554 102 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 SPART-AS1P0CW21 52 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 EMP1P54849 157 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 PEA15Q15121 130 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 SMDT1Q9H4I9 107 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 TENM3Q9P273 2699 aa15.41■□□□□ 0.06
NEK3-202ENST00000550841 CXorf65A6NEN9 183 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 ZNF80P51504 273 aaPredicted RBP15.4■□□□□ 0.06
NEK3-202ENST00000550841 TDRG1Q3Y452 100 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 CLLU1Q5K131 121 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 FAM162BQ5T6X4 162 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 C11orf45Q8TAV5 145 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 RNASE8Q8TDE3 154 aaKnown RBP15.4■□□□□ 0.06
NEK3-202ENST00000550841 SMIM12Q96EX1 92 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 DERL1Q9BUN8 251 aa15.4■□□□□ 0.06
NEK3-202ENST00000550841 GNG4P50150 75 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 MUC21Q5SSG8 566 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 Q6ZQT7 251 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 ZC2HC1AQ96GY0 325 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 MLST8Q9BVC4 326 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 NAGKQ9UJ70 344 aa15.39■□□□□ 0.05
NEK3-202ENST00000550841 TIMM8BQ9Y5J9 83 aaPredicted RBP15.39■□□□□ 0.05
NEK3-202ENST00000550841 TRGV11A0A075B6L2 103 aa15.38■□□□□ 0.05
NEK3-202ENST00000550841 SNURFLB1AK76 121 aa15.38■□□□□ 0.05
NEK3-202ENST00000550841 CENPWQ5EE01 88 aa15.38■□□□□ 0.05
NEK3-202ENST00000550841 IBA57Q5T440 356 aaKnown RBP15.38■□□□□ 0.05
NEK3-202ENST00000550841 SDF2L1Q9HCN8 221 aa15.38■□□□□ 0.05
NEK3-202ENST00000550841 BIN3Q9NQY0 253 aa15.38■□□□□ 0.05
NEK3-202ENST00000550841 RAB19A4D1S5 217 aa15.37■□□□□ 0.05
NEK3-202ENST00000550841 LYRM9A8MSI8 78 aa15.37■□□□□ 0.05
NEK3-202ENST00000550841 ZNF674Q2M3X9 581 aa15.37■□□□□ 0.05
NEK3-202ENST00000550841 DKK2Q9UBU2 259 aa15.37■□□□□ 0.05
NEK3-202ENST00000550841 C3orf84H3BNL1 204 aa15.36■□□□□ 0.05
NEK3-202ENST00000550841 SRP19P09132 144 aaKnown RBP15.36■□□□□ 0.05
NEK3-202ENST00000550841 FAM222AQ5U5X8 452 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms