RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 IGLV2-11P01706 119 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 UBE2G1P62253 170 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 RPL23P62829 140 aaKnown RBP4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 GNG5P63218 68 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 ATRAIDQ6UW56 229 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 RBPMS2Q6ZRY4 209 aaKnown RBP4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 GOLT1AQ6ZVE7 132 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 LINC01551Q86U37 167 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 BAGE2Q86Y30 109 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 RNF182Q8N6D2 247 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TMEM75Q8N9X5 138 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 SMIM12Q96EX1 92 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 IGF2BP2-AS1Q96M15 143 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 MLST8Q9BVC4 326 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 TMEM242Q9NWH2 141 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 PPP1R14DQ9NXH3 145 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 ZFP30Q9Y2G7 519 aa4.59□□□□□ -1.67
DEPDC4-209ENST00000550587 K7EQG2 157 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 IGLV2-8P01709 118 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 SNRPD3P62318 126 aaKnown RBP4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 FLI1Q01543 452 aaPredicted RBP4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 RHEBQ15382 184 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 ADIRFQ15847 76 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 CENPWQ5EE01 88 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 SAPCD1Q5SSQ6 148 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 C9orf47Q6ZRZ4 202 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 SBSPONQ8IVN8 264 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 TMEM183AQ8IXX5 376 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 GBGT1Q8N5D6 347 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 LINC00477Q96M19 166 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 VGLL1Q99990 258 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 CTDSP1Q9GZU7 261 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 BIN3Q9NQY0 253 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 RPH3ALQ9UNE2 315 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 PSG8Q9UQ74 426 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 COL7A1Q02388 2944 aa4.58□□□□□ -1.68
DEPDC4-209ENST00000550587 IGKV3-7A0A075B6H7 116 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 TRAV8-1A0A0A6YYK1 113 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 PGPEP1LA6NFU8 196 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 PRAC2D3DTV9 90 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 K7EN84 100 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 GCGP01275 180 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 IGLV1-51P01701 117 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 MT-ND4LP03901 98 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 FRMD6-AS1P0C7T7 363 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 CD300EQ496F6 205 aaPredicted RBP4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 COX8CQ7Z4L0 72 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 TMEM61Q8N0U2 210 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 OR2K2Q8NGT1 345 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 DYNLRB2Q8TF09 96 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 ISOC2Q96AB3 205 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 SGK494Q96LW2 274 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 SPAG8Q99932 426 aaPredicted RBP4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 AGPAT4-IT1Q9H0P7 198 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 RPS10P5Q9NQ39 176 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 LENEPQ9Y5L5 61 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 SELENOKQ9Y6D0 94 aa4.57□□□□□ -1.68
DEPDC4-209ENST00000550587 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 IGKV2-40A0A087WW87 121 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 TRBV7-9A0A0J9YWB2 115 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 LCE6AA0A183 80 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 CXorf65A6NEN9 183 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 OR4C46A6NHA9 309 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 PPP1R2P9O14990 202 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 IGKV2D-40P01614 121 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 TFPI2P48307 235 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF138P52744 262 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 CMC4P56277 68 aaPredicted RBP4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 OR5I1Q13606 314 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 RNF212Q495C1 297 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 TMEM78Q5T7P6 136 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 ZFAND6Q6FIF0 208 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM231DQ6ZW35 169 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 Q86TA4 180 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 GTSCR1Q86UQ5 136 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF738Q8NE65 137 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 OR8A1Q8NGG7 326 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 OR10J6PQ8NGY7 276 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 SFRP2Q96HF1 295 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 TUBA4BQ9H853 241 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 OSTCQ9NRP0 149 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 SMCO4Q9NRQ5 59 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF492Q9P255 531 aa4.56□□□□□ -1.68
DEPDC4-209ENST00000550587 A0A0J9YX75 114 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 IZUMO1RA6ND01 250 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 SCO1O75880 301 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 DUSP14O95147 198 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 ZNF688P0C7X2 276 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 MGST1P10620 155 aaKnown RBP4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 ERVFC1-1P60608 527 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 ERCC8Q13216 396 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 BTN1A1Q13410 526 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 PSMG4Q5JS54 123 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 EBLN2Q6P2I7 272 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 FOXI2Q6ZQN5 318 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 FAM24BQ8N5W8 94 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 C15orf54Q8N8G6 183 aa4.55□□□□□ -1.68
DEPDC4-209ENST00000550587 NHLRC2Q8NBF2 726 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms