RNA–Protein interactions for RNA: ENST00000549940.5

GNPTAB-206, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best) BASIC

Gene GNPTAB, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-206ENST00000549940 KCNIP4Q6PIL6 250 aa20.58■□□□□ 0.88
GNPTAB-206ENST00000549940 APRG1Q8IVJ8 170 aa20.58■□□□□ 0.88
GNPTAB-206ENST00000549940 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.58■□□□□ 0.88
GNPTAB-206ENST00000549940 ODF3Q96PU9 254 aa20.58■□□□□ 0.88
GNPTAB-206ENST00000549940 RPP21Q9H633 154 aaKnown RBP20.58■□□□□ 0.88
GNPTAB-206ENST00000549940 SH2D1AO60880 128 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 GPX1P07203 203 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 HLA-DRB4P13762 266 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 FAM19A4Q96LR4 140 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 IMMP2LQ96T52 175 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 HLA-DRB4X5D2U9 266 aa20.57■□□□□ 0.88
GNPTAB-206ENST00000549940 LEPP41159 167 aa20.56■□□□□ 0.88
GNPTAB-206ENST00000549940 ZNF80P51504 273 aaPredicted RBP20.56■□□□□ 0.88
GNPTAB-206ENST00000549940 IL36BQ9NZH7 164 aa20.56■□□□□ 0.88
GNPTAB-206ENST00000549940 J3KRW8 73 aa20.55■□□□□ 0.88
GNPTAB-206ENST00000549940 CRISP2P16562 243 aa20.55■□□□□ 0.88
GNPTAB-206ENST00000549940 H3BMM0 161 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 PFN1P07737 140 aaKnown RBP20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 TSPOP30536 169 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 ZNF124Q15973 351 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 ZFAND2AQ8N6M9 145 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 OR2D3Q8NGH3 330 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 FAM110AQ9BQ89 295 aa20.54■□□□□ 0.88
GNPTAB-206ENST00000549940 CA1P00915 261 aaPredicted RBP20.53■□□□□ 0.88
GNPTAB-206ENST00000549940 IGLL1P15814 213 aa20.53■□□□□ 0.88
GNPTAB-206ENST00000549940 ELOBQ15370 118 aa20.53■□□□□ 0.88
GNPTAB-206ENST00000549940 CT83Q5H943 113 aa20.53■□□□□ 0.88
GNPTAB-206ENST00000549940 TRRAPQ9Y4A5 3859 aa20.52■□□□□ 0.88
GNPTAB-206ENST00000549940 A8MWL6 223 aa20.52■□□□□ 0.88
GNPTAB-206ENST00000549940 CD7P09564 240 aa20.52■□□□□ 0.88
GNPTAB-206ENST00000549940 RNASE4P34096 147 aaKnown RBP20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 STHQ8IWL8 128 aa20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 NOTCH3Q9UM47 2321 aa20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 TMEM189A5PLL7 270 aa20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 FAM3BP58499 235 aaPredicted RBP20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 PRR9Q5T870 116 aa20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 TSKUQ8WUA8 353 aa20.51■□□□□ 0.87
GNPTAB-206ENST00000549940 TRAV21A0A0B4J279 112 aa20.5■□□□□ 0.87
GNPTAB-206ENST00000549940 XKRY2A2RUG3 117 aa20.5■□□□□ 0.87
GNPTAB-206ENST00000549940 ORM1P02763 201 aa20.5■□□□□ 0.87
GNPTAB-206ENST00000549940 CDKN1BP46527 198 aa20.5■□□□□ 0.87
GNPTAB-206ENST00000549940 GTSCR1Q86UQ5 136 aa20.5■□□□□ 0.87
GNPTAB-206ENST00000549940 A0A1W2PPQ1 181 aa20.49■□□□□ 0.87
GNPTAB-206ENST00000549940 KLLNB2CW77 178 aa20.49■□□□□ 0.87
GNPTAB-206ENST00000549940 AGRNO00468 2067 aa20.49■□□□□ 0.87
GNPTAB-206ENST00000549940 SMIM27A0A1W2PRY6 76 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 A8MTW9 85 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 TCL1AP56279 114 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 RPL19P84098 196 aaKnown RBP20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 COLCA2A8K830 154 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 SPINK13Q1W4C9 94 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 AMTNQ6UX39 209 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 YPEL4Q96NS1 127 aa20.48■□□□□ 0.87
GNPTAB-206ENST00000549940 M0R2Z0 102 aa20.47■□□□□ 0.87
GNPTAB-206ENST00000549940 RPS20P60866 119 aaKnown RBP20.47■□□□□ 0.87
GNPTAB-206ENST00000549940 BTF3L4Q96K17 158 aa20.47■□□□□ 0.87
GNPTAB-206ENST00000549940 TMSB15BA0A087X1C1 80 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 TGIF2-C20orf24A0A0A6YYL0 155 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 Q6AWC8 147 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 CLUHP3Q96NS8 147 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 GFRA4Q9GZZ7 299 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 NAT8BQ9UHF3 227 aa20.46■□□□□ 0.87
GNPTAB-206ENST00000549940 TRBV24-1A0A075B6N3 115 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 WIPF1O43516 503 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 KIR3DS1Q14943 382 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 PRR31Q5SQ13 230 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 NEU1Q99519 415 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 C19orf73Q9NVV2 129 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 TRAV9-1A0A075B6T8 112 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 C7orf71A4D174 169 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 FAM231BA6NCW3 169 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 LINC01559Q495D7 138 aa20.45■□□□□ 0.86
GNPTAB-206ENST00000549940 HIGD1CA8MV81 97 aa20.44■□□□□ 0.86
GNPTAB-206ENST00000549940 LURAP1LQ8IV03 231 aa20.44■□□□□ 0.86
GNPTAB-206ENST00000549940 TRAV12-2A0A075B6T6 113 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 CXCL1P09341 107 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 GZMBP10144 247 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 FXYD7P58549 80 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 GFI1BQ5VTD9 330 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 FAM210BQ96KR6 192 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 NAGKQ9UJ70 344 aa20.43■□□□□ 0.86
GNPTAB-206ENST00000549940 TRAV12-3A0A0B4J271 114 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 RBMY1BA6NDE4 496 aaKnown RBP20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 RBMY1EA6NEQ0 496 aaKnown RBP20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 RBMY1DP0C7P1 496 aaKnown RBP20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 NUTF2P61970 127 aaKnown RBP20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 TRPT1Q86TN4 253 aaKnown RBP20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 Q6ZQT7 251 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 MDFIQ99750 246 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 PYGO2Q9BRQ0 406 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 WFDC10AQ9H1F0 79 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 C11orf21Q9P2W6 132 aa20.42■□□□□ 0.86
GNPTAB-206ENST00000549940 NUP35Q8NFH5 326 aa20.41■□□□□ 0.86
GNPTAB-206ENST00000549940 GTSF1Q8WW33 167 aa20.41■□□□□ 0.86
GNPTAB-206ENST00000549940 IGKV3D-20A0A0C4DH25 116 aa20.4■□□□□ 0.86
GNPTAB-206ENST00000549940 RAB5AP20339 215 aa20.39■□□□□ 0.86
GNPTAB-206ENST00000549940 AMBPP02760 352 aa20.38■□□□□ 0.85
GNPTAB-206ENST00000549940 PGLYRP4Q96LB8 373 aa20.38■□□□□ 0.85
GNPTAB-206ENST00000549940 SPINK4O60575 86 aa20.38■□□□□ 0.85
GNPTAB-206ENST00000549940 FOXA3P55318 350 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms