RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 PET100P0DJ07 73 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 BTF3P20290 206 aaKnown RBP9.93□□□□□ -0.82
COL2A1-209ENST00000546974 CSN1S1P47710 185 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 ARPC5LQ9BPX5 153 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 KRTAP1-5Q9BYS1 174 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 TP53TG3Q9ULZ0 132 aa9.93□□□□□ -0.82
COL2A1-209ENST00000546974 RANP62826 216 aaKnown RBP9.92□□□□□ -0.82
COL2A1-209ENST00000546974 FFAR4Q5NUL3 377 aa9.92□□□□□ -0.82
COL2A1-209ENST00000546974 Q6ZQT7 251 aa9.92□□□□□ -0.82
COL2A1-209ENST00000546974 ST6GAL2Q96JF0 529 aa9.92□□□□□ -0.82
COL2A1-209ENST00000546974 SSNA1O43805 119 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 IFNA5P01569 189 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 RPL12P30050 165 aaKnown RBP9.91□□□□□ -0.82
COL2A1-209ENST00000546974 TAS2R45P59539 299 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 DEFA1P59665 94 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 DEFA3P59666 94 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 SLAQ13239 276 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 ZNF266Q14584 549 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 Q8TAT8 98 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 SCGB1C1Q8TD33 95 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 LENEPQ9Y5L5 61 aa9.91□□□□□ -0.82
COL2A1-209ENST00000546974 DIRC3C9JPN6 131 aa9.9□□□□□ -0.82
COL2A1-209ENST00000546974 PAX4O43316 350 aa9.9□□□□□ -0.82
COL2A1-209ENST00000546974 UBE2L3P68036 154 aaKnown RBP9.9□□□□□ -0.82
COL2A1-209ENST00000546974 ZNF415Q09FC8 603 aa9.9□□□□□ -0.82
COL2A1-209ENST00000546974 MRPL16Q9NX20 251 aaKnown RBP9.9□□□□□ -0.82
COL2A1-209ENST00000546974 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
COL2A1-209ENST00000546974 ICOSQ9Y6W8 199 aa9.9□□□□□ -0.82
COL2A1-209ENST00000546974 CDK2AP2O75956 126 aa9.89□□□□□ -0.83
COL2A1-209ENST00000546974 Q6AWC8 147 aa9.89□□□□□ -0.83
COL2A1-209ENST00000546974 TMED6Q8WW62 240 aa9.89□□□□□ -0.83
COL2A1-209ENST00000546974 SMIM3Q9BZL3 60 aa9.89□□□□□ -0.83
COL2A1-209ENST00000546974 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
COL2A1-209ENST00000546974 CRYBA4P53673 196 aa9.88□□□□□ -0.83
COL2A1-209ENST00000546974 FHL2Q14192 279 aa9.88□□□□□ -0.83
COL2A1-209ENST00000546974 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
COL2A1-209ENST00000546974 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
COL2A1-209ENST00000546974 SIVA1O15304 175 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 ACOT6Q3I5F7 207 aaPredicted RBP9.87□□□□□ -0.83
COL2A1-209ENST00000546974 FAM74A1Q5RGS3 127 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 MUC21Q5SSG8 566 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 SPATA12Q7Z6I5 190 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 ARL6IP6Q8N6S5 226 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 WFDC1Q9HC57 220 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 OTORQ9NRC9 128 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 MDFICQ9P1T7 246 aa9.87□□□□□ -0.83
COL2A1-209ENST00000546974 TRGV11A0A075B6L2 103 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 A0A1W2PPV4 95 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 PGPA6NDG6 321 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
COL2A1-209ENST00000546974 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 IQCF2Q8IXL9 164 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 CMTM2Q8TAZ6 248 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 RASL10AQ92737 203 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 HYLS1Q96M11 299 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 C8orf49Q96NF6 230 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 SPXQ9BT56 116 aa9.86□□□□□ -0.83
COL2A1-209ENST00000546974 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL2A1-209ENST00000546974 NXPH4O95158 308 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 LINC00315P59091 139 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 TMEM183BQ1AE95 376 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 LYPD5Q6UWN5 251 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 TMEM183AQ8IXX5 376 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 OR10G4Q8NGN3 311 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 KRTAP4-5Q9BYR2 181 aa9.85□□□□□ -0.83
COL2A1-209ENST00000546974 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
COL2A1-209ENST00000546974 NEGR1Q7Z3B1 354 aa9.84□□□□□ -0.83
COL2A1-209ENST00000546974 SFTA3P0C7M3 94 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 KRTAP10-2P60368 255 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 RAB2AP61019 212 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
COL2A1-209ENST00000546974 GOLT1AQ6ZVE7 132 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 OR10G9Q8NGN4 311 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 OR10G7Q8NGN6 311 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 ZNF479Q96JC4 524 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 RPH3ALQ9UNE2 315 aa9.83□□□□□ -0.84
COL2A1-209ENST00000546974 TRAV21A0A0B4J279 112 aa9.82□□□□□ -0.84
COL2A1-209ENST00000546974 K7EQD1 137 aa9.82□□□□□ -0.84
COL2A1-209ENST00000546974 NAGKQ9UJ70 344 aa9.82□□□□□ -0.84
COL2A1-209ENST00000546974 TRAV4A0A0B4J268 109 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 IGHV3-16A0A0C4DH30 117 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 M0R2P5 195 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 GNRH2O43555 120 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 ORM1P02763 201 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 SRIP30626 198 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 MAPKAPK5-AS1Q8N8E1 139 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 OR2G3Q8NGZ4 309 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 PCNPQ8WW12 178 aaKnown RBP9.81□□□□□ -0.84
COL2A1-209ENST00000546974 TVP23CQ96ET8 276 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 TREM1Q9NP99 234 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 ALG5Q9Y673 324 aa9.81□□□□□ -0.84
COL2A1-209ENST00000546974 TRAV9-2A0A087WT02 112 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 SERTM2A0A1B0GWG4 89 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 HMGB3O15347 200 aaKnown RBP9.8□□□□□ -0.84
COL2A1-209ENST00000546974 STAG3L2P0CL84 134 aa9.8□□□□□ -0.84
COL2A1-209ENST00000546974 STAG3L3P0CL85 134 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms