RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PATE2Q6UY27 113 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 NTN5Q8WTR8 489 aaPredicted RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 TMEM101Q96IK0 257 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 MDFICQ9P1T7 246 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 ATMQ13315 3056 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 INS-IGF2F8WCM5 200 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 ASIPP42127 132 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 WT1-ASQ06250 92 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 DEFB109BQ30KR1 87 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 RUSC1-AS1Q66K80 236 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 ORMDL3Q8N138 153 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 MLST8Q9BVC4 326 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 MRPL32Q9BYC8 188 aaKnown RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 MRPL36Q9P0J6 103 aaKnown RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 TRBV7-3A0A075B6L6 115 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 A0A1W2PPI3 338 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 NCBP2LA6PVI3 153 aaKnown RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 J3KT08 172 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 SLC25A20O43772 301 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 CKS2P33552 79 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 HERVK_113P63121 156 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 TAL2Q16559 108 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 MRGPRG-AS1Q2M3A8 158 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 TMEM30BQ3MIR4 351 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 PRR30Q53SZ7 412 aaPredicted RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 CT83Q5H943 113 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 C10orf113Q5VZT2 155 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 OR13C6PQ8NH95 151 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 FAM57AQ8TBR7 257 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 GFRA4Q9GZZ7 299 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 SPANXA1Q9NS26 97 aa6.17□□□□□ -1.42
UBR1-202ENST00000546274 MRPL35Q9NZE8 188 aaKnown RBP6.17□□□□□ -1.42
UBR1-202ENST00000546274 ZZEF1O43149 2961 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 TRAV2A0A0B4J234 112 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 NPYP01303 97 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 IGLV2-23P01705 113 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 CD7P09564 240 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 IGLC6P0CF74 106 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 ORM2P19652 201 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 PRADC1Q9BSG0 188 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 AKAP13Q12802 2813 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 ZGRF1Q86YA3 2104 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 CCL3L1P16619 93 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 MYCNOSP40205 109 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 CRIP2P52943 208 aaPredicted RBP6.16□□□□□ -1.42
UBR1-202ENST00000546274 FAM27E3Q08E93 113 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 TWIST1Q15672 202 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 C10orf55Q5SWW7 151 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 ZNF493Q6ZR52 646 aa6.16□□□□□ -1.42
UBR1-202ENST00000546274 H7C2G1 150 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 SRSF2Q01130 221 aaKnown RBP6.15□□□□□ -1.42
UBR1-202ENST00000546274 ZNF56Q15929 161 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 SCGB1D4Q6XE38 83 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 GATD1Q8NB37 220 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 OR11H6Q8NGC7 330 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 FXYD5Q96DB9 178 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 TRGV9Q99603 122 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 ADGRG4Q8IZF6 3080 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 CD40P25942 277 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 CCL8P80075 99 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 TMEM200BQ69YZ2 307 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 Q8N1Y9 231 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 SIGLEC9Q9Y336 463 aa6.15□□□□□ -1.42
UBR1-202ENST00000546274 TEX49A0A1B0GTD5 131 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 Q6Q795 121 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 LINC00305Q7Z4B0 112 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 TRPT1Q86TN4 253 aaKnown RBP6.15□□□□□ -1.43
UBR1-202ENST00000546274 ZCCHC24Q8N2G6 241 aaKnown RBP6.15□□□□□ -1.43
UBR1-202ENST00000546274 TMEM167AQ8TBQ9 72 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 RITA1Q96K30 269 aa6.15□□□□□ -1.43
UBR1-202ENST00000546274 PLXNB1O43157 2135 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 DUSP14O95147 198 aaKnown RBP6.14□□□□□ -1.43
UBR1-202ENST00000546274 NDUFA7O95182 113 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 MRPL51Q4U2R6 128 aaKnown RBP6.14□□□□□ -1.43
UBR1-202ENST00000546274 IGFL3Q6UXB1 125 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 GOLT1AQ6ZVE7 132 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 THAP8Q8NA92 274 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 NUP37Q8NFH4 326 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 PRORYQ9H606 182 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 TPSG1Q9NRR2 321 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 FAM236AA0A1B0GUQ0 79 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 FAM236BA0A1B0GV22 79 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 K7EM74 188 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 HRCT1Q6UXD1 115 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 PIFOQ8TCI5 191 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 K7ENP7 123 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 TCRAP04437 139 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 ERHP84090 104 aaKnown RBP6.14□□□□□ -1.43
UBR1-202ENST00000546274 OR4C13Q8NGP0 309 aa6.14□□□□□ -1.43
UBR1-202ENST00000546274 UBE2D3P61077 147 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 UBE2D2P62837 147 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 FAM104BQ5XKR9 115 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 PVRIGQ6DKI7 326 aa6.13□□□□□ -1.43
UBR1-202ENST00000546274 LYZL1Q6UWQ5 148 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 225 ms