RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	VGLL1	Q99990	258 aa		4.99	□□□□□ -1.61
SNHG1-225	ENST00000545920	CHAC1	Q9BUX1	264 aa		4.99	□□□□□ -1.61
SNHG1-225	ENST00000545920	MEGF9	Q9H1U4	602 aa		4.99	□□□□□ -1.61
SNHG1-225	ENST00000545920	HHLA3	Q9XRX5	114 aa		4.99	□□□□□ -1.61
SNHG1-225	ENST00000545920	SZT2	Q5T011	3432 aa		4.99	□□□□□ -1.61
SNHG1-225	ENST00000545920	IGHV1-69D	A0A0B4J2H0	117 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		A0A1B0GWB2	263 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		A0A1W2PRD5	423 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		A0A1W2PRF3	423 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		A0A1W2PRM7	423 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	FAM223B	A6NKX1	122 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	NCBP2L	A6PVI3	153 aa	Known RBP	4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		H3BUA1	57 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920		H7C1H1	209 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	IGHG4	P01861	327 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	APELA	P0DMC3	54 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	UBE2E1	P51965	193 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	FHL3	Q13643	280 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	PRSS57	Q6UWY2	283 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	DTX2	Q86UW9	622 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	FAM223A	Q8IWN6	122 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	LINC01356	Q8N9X3	169 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	LINC00477	Q96M19	166 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	VCX2	Q9H322	139 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	SMAD5-AS1	Q9Y6J3	95 aa		4.98	□□□□□ -1.61
SNHG1-225	ENST00000545920	TRBV25-1	A0A075B6N4	114 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	TMSB15B	A0A087X1C1	80 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	IGHV7-81	A0A0B4J1V7	117 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920		E9PLD3	99 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920		F8VRH5	84 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	OVOL1	O14753	267 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	PPIF	P30405	207 aa	Known RBP	4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	ZNF80	P51504	273 aa	Predicted RBP	4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	UCN	P55089	124 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	FAM106A	Q4KMX7	169 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	C11orf71	Q6IPW1	123 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	FOXI2	Q6ZQN5	318 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	LHFPL4	Q7Z7J7	247 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	NRAC	Q8N912	160 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920		Q8N9W7	124 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	TMEM158	Q8WZ71	300 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	DKK2	Q9UBU2	259 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	HILPDA	Q9Y5L2	63 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	PLCE1	Q9P212	2302 aa		4.97	□□□□□ -1.61
SNHG1-225	ENST00000545920	TRAV21	A0A0B4J279	112 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	TMEM8B	A6NDV4	472 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920		K7ENP7	123 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	NDUFS8	O00217	210 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	CIDEA	O60543	219 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	UQCRFS1	P47985	274 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	NDP	Q00604	133 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	C15orf32	Q32M92	178 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	ZC2HC1B	Q5TFG8	222 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	SPANXN1	Q5VSR9	72 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	ZNF575	Q86XF7	245 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	PCP2	Q8IVA1	136 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	DYNAP	Q8N1N2	210 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	POM121L12	Q8N7R1	296 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	ATP6V0E2	Q8NHE4	81 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	TOMM6	Q96B49	74 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	FOXC2	Q99958	501 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	SMIM2	Q9BVW6	85 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	SIRPD	Q9H106	197 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	NAV3	Q8IVL0	2385 aa		4.96	□□□□□ -1.62
SNHG1-225	ENST00000545920	IGKV3D-20	A0A0C4DH25	116 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	IGHV7-4-1	A0A0J9YVY3	117 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	OR11H12	B2RN74	326 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	NBL1	P41271	181 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	SLURP1	P55000	103 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	ATP5G2	Q06055	141 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	APRG1	Q8IVJ8	170 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	MTURN	Q8N3F0	131 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	OR11H1	Q8NG94	326 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	OR11H2	Q8NH07	326 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	MCRIP2	Q9BUT9	160 aa	Known RBP	4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	AGPAT4-IT1	Q9H0P7	198 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	DPH3P1	Q9H4G8	78 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	ZNF580	Q9UK33	172 aa		4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.95	□□□□□ -1.62
SNHG1-225	ENST00000545920	MYMX	A0A1B0GTQ4	84 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	CLPSL1	A2RUU4	121 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	IGLL5	B9A064	214 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	SMKR1	H3BMG3	65 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920		M0QXV9	152 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	NDUFA4	O00483	81 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	NXPH4	O95158	308 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	FXYD2	P54710	66 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	HERVK_113	P61574	105 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	SUMO2	P61956	95 aa	Known RBP	4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	RRN3P1	Q2M238	152 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	CD300E	Q496F6	205 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	KRTAP5-3	Q6L8H2	238 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920		Q71RC1	249 aa	Predicted RBP	4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	OR10J6P	Q8NGY7	276 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920		Q8TAT8	98 aa		4.94	□□□□□ -1.62
SNHG1-225	ENST00000545920	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.94	□□□□□ -1.62

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