RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 KIR2DL5BA0A0G2JN68 375 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 KIR2DL5BA0A0G2JPC4 375 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 FAM120AOSQ5T036 256 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
COL4A6-209ENST00000545689 IGF2BP2-AS1Q96M15 143 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 MRPL35Q9NZE8 188 aaKnown RBP9.86□□□□□ -0.83
COL4A6-209ENST00000545689 MED12Q93074 2177 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 CACNA1EQ15878 2313 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 NOTCH4Q99466 2003 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 TMEM243Q9BU79 118 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 ZNF747Q9BV97 191 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 TRAV26-2A0A0B4J265 109 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 H3BMM0 161 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 UBE2WQ96B02 151 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 PPDPFLQ8WWR9 84 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 LAMTOR3Q9UHA4 124 aa9.86□□□□□ -0.83
COL4A6-209ENST00000545689 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 HERVK_113P63121 156 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 DKK4Q9UBT3 224 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 ESPL1Q14674 2120 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 A0A1W2PPM0 123 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 FOXE3Q13461 319 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 DYNAPQ8N1N2 210 aa9.85□□□□□ -0.83
COL4A6-209ENST00000545689 SPRY4Q9C004 299 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 PLA2G2EQ9NZK7 142 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 IGLV11-55A0A075B6I3 123 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 TRBV6-1A0A0K0K1D8 114 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 GAGE12JA6NER3 117 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 GAGE4Q13068 117 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 GAGE5Q13069 117 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 CR1LQ2VPA4 569 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 EGR2P11161 476 aaPredicted RBP9.84□□□□□ -0.83
COL4A6-209ENST00000545689 CENPVL3A0A0U1RRI6 287 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 RNF152Q8N8N0 203 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 AGPAT4-IT1Q9H0P7 198 aa9.84□□□□□ -0.83
COL4A6-209ENST00000545689 LINC01545Q5VT33 79 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 C11orf1Q9H5F2 150 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 Q96MF0 132 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 KNCNA6PVL3 124 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 K7EIM0 57 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 DEFB130BP0DP73 79 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 DEFB130AP0DP74 79 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 PRSS33Q8NF86 280 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 C17orf77Q96MU5 243 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
COL4A6-209ENST00000545689 APOC4P55056 127 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 UTF1Q5T230 341 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 CFHR4Q92496 578 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 J3QQQ9 107 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 VPREB3Q9UKI3 123 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 UBE2DNLQ8IWF7 75 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 SPRNQ5BIV9 151 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 WI2-2373I1.2A0A1W2PRP0 233 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 VWC2LB2RUY7 222 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 F8WEM9 126 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 HLA-DMBP28068 263 aa9.82□□□□□ -0.84
COL4A6-209ENST00000545689 PI4KAP42356 2102 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 K7EP13 123 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 IGLV2-14P01704 120 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 ZNRF2Q8NHG8 242 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 DAD1P61803 113 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 HEATR1Q9H583 2144 aaKnown RBP9.81□□□□□ -0.84
COL4A6-209ENST00000545689 IGLV2-23P01705 113 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 PATE2Q6UY27 113 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 OBSL1O75147 1896 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 TRAV12-2A0A075B6T6 113 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 TCF15Q12870 199 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 WT1P19544 449 aaPredicted RBP9.81□□□□□ -0.84
COL4A6-209ENST00000545689 GAGE2AQ6NT46 116 aa9.81□□□□□ -0.84
COL4A6-209ENST00000545689 FER1L5A0AVI2 2057 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 COL4A4P53420 1690 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-209ENST00000545689 SOCS3O14543 225 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 HIST1H4AP62805 103 aaKnown RBP9.8□□□□□ -0.84
COL4A6-209ENST00000545689 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 SNRNP200O75643 2136 aaKnown RBP9.8□□□□□ -0.84
COL4A6-209ENST00000545689 CRYGCP07315 174 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 ZNF48Q96MX3 618 aaPredicted RBP9.8□□□□□ -0.84
COL4A6-209ENST00000545689 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 DKK2Q9UBU2 259 aa9.8□□□□□ -0.84
COL4A6-209ENST00000545689 IGHV3-16A0A0C4DH30 117 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 NPSP0C0P6 89 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 MED14OSP0DP75 135 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 KIAA2026Q5HYC2 2103 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 DOCK8Q8NF50 2099 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 FGF6P10767 208 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 C16orf54Q6UWD8 224 aa9.79□□□□□ -0.84
COL4A6-209ENST00000545689 ODF3L1Q8IXM7 274 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 PRSS29PA6NIE9 313 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 KIF26AQ9ULI4 1882 aaPredicted RBP9.78□□□□□ -0.84
COL4A6-209ENST00000545689 PRSS47A8MTI9 375 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 CTSGP08311 255 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 GAGE7O76087 117 aa9.78□□□□□ -0.84
COL4A6-209ENST00000545689 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms